Transcript Information: R_Transcript_53223.p1


Annotated TAIR IDAT1G20890.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7266088-7267060 | Reverse length=197
E-Value3.5E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0734250376641
Replicate 25.518258442745
Replicate 38.2229314447727
Condition 2: 8 Hour
Replicate 13.76705614573
Replicate 26.1635764049422
Replicate 36.7486757434772
Condition 3: 24 Hour
Replicate 15.5922863759792
Replicate 25.3724348579611
Replicate 37.7168189601241


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53223.p1 GENE.R_Transcript_53223~~R_Transcript_53223.p1 ORF type:3prime_partial len:156 (+),score=29.45 R_Transcript_53223:330-794(+)
ATGGGCATTGTAGTTTTGCCACCATTGATGCATAAAATTTTTAACAATTTTGTCCTCATTCTGCTCCTCATAACATCCACTTCTGGAAATGGAATGGAGAACAAGGTCTTGAATGTTGGGAATGAGCTATTAAAGGAAACCCTCCCGTTACAAATGGGTTCCCGCTATTATCAACTTCAAGGGTTGAAACCCTTTATGTGGTATGAAGTGAAGATATCATACCCAGCTTCTATACCTGCTATATTTTCGTTGCAATTGAGGAGAGGCAGTTCTGTTGTTGGGATGCACAGGCTAAGAAAATTGCTTAATACTGAGAAGCTGATTTTCAAGACAGAGAGTCTTGATGAGATGAATGCTCAGAGTGGAATGTATGTCTTGGTGACCGTGGAACCCGAGGGAGTTGTTGCAATACCCGGTGTTCGAGAAAGAGAGGATATCATTTTCAATATAGTTTGTGATGAGCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53223.p1 GENE.R_Transcript_53223~~R_Transcript_53223.p1 ORF type:3prime_partial len:156 (+),score=29.45 R_Transcript_53223:330-794(+)
MGIVVLPPLMHKIFNNFVLILLLITSTSGNGMENKVLNVGNELLKETLPLQMGSRYYQLQGLKPFMWYEVKISYPASIPAIFSLQLRRGSSVVGMHRLRKLLNTEKLIFKTESLDEMNAQSGMYVLVTVEPEGVVAIPGVREREDIIFNIVCDEL

Click here to download the sequence:
Link to NCBI Protein BLAST