Transcript Information: R_Transcript_53229.p1


Annotated TAIR IDAT1G20890.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7266088-7267060 | Reverse length=197
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1484002169815
Replicate 22.5904526487641
Replicate 34.7598415784213
Condition 2: 8 Hour
Replicate 16.8369622904646
Replicate 25.2272191317057
Replicate 33.5360280429325
Condition 3: 24 Hour
Replicate 15.5158368014614
Replicate 24.7261269051237
Replicate 33.4110708602957


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53229.p1 GENE.R_Transcript_53229~~R_Transcript_53229.p1 ORF type:complete len:154 (+),score=28.33 R_Transcript_53229:317-778(+)
ATGTTGGGGAGGAGTTATTTAAGGAAACTTTGCCATTGTGGATGGGATCCCGCTATTATCAGCTCCAAGACACCTGCCATTTTTTCCTTGCTATTGAAGAGAGGTAATTCTGATATTGGGGTGAACCGGCTAAGAAAATTGCTCGATACTGACAAATTGATATTCAAGGCAGAGAATCTTGATGAGATGAACAATCAGGGTGGAATGTATGTTTTAATAACTGTGGAACCTGAGGGAGTTGTTGCAATACCTGGAGTCCAAGAAAGAGAGAGTATCTTGTTCAATATAGTTTGTGATGAGCTGATATTGGGCATCCCCCACAAAGCTTGGCTGGTTGCAGTCCTAGCATTCTTGTGTGTAGTACTCGGATTCCTTGTGCCTCGTTTTCTTCCTCCATTTCTTCTGCTAAAGGATCAATCTGTCAATTCAGTTGATCATATGGTTGCAAATAAAGATTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53229.p1 GENE.R_Transcript_53229~~R_Transcript_53229.p1 ORF type:complete len:154 (+),score=28.33 R_Transcript_53229:317-778(+)
MLGRSYLRKLCHCGWDPAIISSKTPAIFSLLLKRGNSDIGVNRLRKLLDTDKLIFKAENLDEMNNQGGMYVLITVEPEGVVAIPGVQERESILFNIVCDELILGIPHKAWLVAVLAFLCVVLGFLVPRFLPPFLLLKDQSVNSVDHMVANKDS*

Click here to download the sequence:
Link to NCBI Protein BLAST