Transcript Information: R_Transcript_53231.p1


Annotated TAIR IDAT1G20890.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7266088-7267060 | Reverse length=197
E-Value2.1E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3142131887397
Replicate 20.67188161332154
Replicate 31.1911503549999
Condition 2: 8 Hour
Replicate 11.5670953566237
Replicate 21.1627658557417
Replicate 33.848141451522
Condition 3: 24 Hour
Replicate 10.64281860237571
Replicate 22.1173048534954
Replicate 31.926118012447


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53231.p1 GENE.R_Transcript_53231~~R_Transcript_53231.p1 ORF type:complete len:250 (+),score=41.08 R_Transcript_53231:79-828(+)
ATGAAAACAGCTTTTGCAGAGGTGCCCATCTCAGGGAAAGAGGTTAATTCAGTTGGGTTTCCATCAGAAATCAATAAGTTTCTAAAAGGGCAAAGCTTGATTATTTATAAGGTGTTCGAATCAATTCAAATGTTGTTAGCATGTATGCAAAAATTATCCCTTCCATTCAAAGCTCTTGGACTGCTTCTGCTATGCTTAACTTTCAGTTGTGCAAATGGCATTCACAGCAAGGTCTTGAATGTTGGGGAGGAGTTATTTAAGGAAACTTTGCCATTGTGGATGGGATCCCGCTATTATCAGCTCCAAGGTTTGAAACCCTATACTTGGTATGAAGTAAAGATATCATACCCTGCTTCTACACCTGCCATTTTTTCCTTGCTATTGAAGAGAGGTAATTCTGATATTGGGGTGAACCGGCTAAGAAAATTGCTCGATACTGACAAATTGATATTCAAGGCAGAGAATCTTGATGAGATGAACAATCAGGGTGGAATGTATGTTTTAATAACTGTGGAACCTGAGGGAGTTGTTGCAATACCTGGAGTCCAAGAAAGAGAGAGTATCTTGTTCAATATAGTTTGTGATGAGCTGATATTGGGCATCCCCCACAAAGCTTGGCTGGTTGCAGTCCTAGCATTCTTGTGTGTAGTACTCGGATTCCTTGTGCCTCGTTTTCTTCCTCCATTTCTTCTGCTAAAGGATCAATCTGTCAATTCAGTTGATCATATGGTTGCAAATAAAGATTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53231.p1 GENE.R_Transcript_53231~~R_Transcript_53231.p1 ORF type:complete len:250 (+),score=41.08 R_Transcript_53231:79-828(+)
MKTAFAEVPISGKEVNSVGFPSEINKFLKGQSLIIYKVFESIQMLLACMQKLSLPFKALGLLLLCLTFSCANGIHSKVLNVGEELFKETLPLWMGSRYYQLQGLKPYTWYEVKISYPASTPAIFSLLLKRGNSDIGVNRLRKLLDTDKLIFKAENLDEMNNQGGMYVLITVEPEGVVAIPGVQERESILFNIVCDELILGIPHKAWLVAVLAFLCVVLGFLVPRFLPPFLLLKDQSVNSVDHMVANKDS*

Click here to download the sequence:
Link to NCBI Protein BLAST