Transcript Information: R_Transcript_53235.p1


Annotated TAIR IDAT1G20890.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7266088-7267060 | Reverse length=197
E-Value5E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.280909540682
Replicate 20.2455707651029
Replicate 30.53583011920824
Condition 2: 8 Hour
Replicate 10.42957657802185
Replicate 21.4384192997254
Replicate 30.84919815767892
Condition 3: 24 Hour
Replicate 10.67128091309076
Replicate 20.77386873300271
Replicate 31.5359792762735


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53235.p1 GENE.R_Transcript_53235~~R_Transcript_53235.p1 ORF type:complete len:171 (+),score=24.19 R_Transcript_53235:1069-1581(+)
ATGTTGTTAGCATGTATGCAAAAATTATCCCTTCCATTCAAAGCTCTTGGACTGCTTCTGCTATGCTTAACTTTCAGTTGTGCAAATGGCATTCACAGCAAGGTCTTGAATGTTGGGGAGGAGTTATTTAAGGAAACTTTGCCATTGTGGATGGGATCCCGCTATTATCAGCTTCGAGGGTTGAAACCCTATACTTGGTATGAAGTAAAGATATCATACCCTGCTTCTACACCTGCCATTTTTTCCTTGCTATTGAAGAGAGGTAATTCTGATATTGGGGTGAACCGGCTAAGAAAATTGCTCGATACTGACAAATTGATATTCAAGGCAGAGAATCTTGATGAGATGAACAATCAGGGTGGAATGTATGTTTTAATAACTGTGGAACCTGAGGGAGTTGTTGCAATACCTGGAGTCCAAGAAAGAGAGAGTATCTTGTTCAATATAGAATTGTTTCCTCTCCCGCAAAGAATAGTAGTATGTTTCATTTCAACAAGGTTTGTGATGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53235.p1 GENE.R_Transcript_53235~~R_Transcript_53235.p1 ORF type:complete len:171 (+),score=24.19 R_Transcript_53235:1069-1581(+)
MLLACMQKLSLPFKALGLLLLCLTFSCANGIHSKVLNVGEELFKETLPLWMGSRYYQLRGLKPYTWYEVKISYPASTPAIFSLLLKRGNSDIGVNRLRKLLDTDKLIFKAENLDEMNNQGGMYVLITVEPEGVVAIPGVQERESILFNIELFPLPQRIVVCFISTRFVMS*

Click here to download the sequence:
Link to NCBI Protein BLAST