Transcript Information: R_Transcript_53249.p1


Annotated TAIR IDAT3G60510.3
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22357141-22360003 | Reverse length=426
E-Value3.7E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3253461978007
Replicate 21.2936109261226
Replicate 32.3883802232955
Condition 2: 8 Hour
Replicate 13.5974493524389
Replicate 23.9211025029567
Replicate 36.4519942963461
Condition 3: 24 Hour
Replicate 14.3521909436406
Replicate 22.5086550396865
Replicate 33.8381283100247


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53249.p1 GENE.R_Transcript_53249~~R_Transcript_53249.p1 ORF type:5prime_partial len:211 (+),score=31.28,ECH_2|PF16113.1|8.3e-37,ECH_1|PF00378.16|9.1e-13 R_Transcript_53249:2-634(+)
CTCACGCCAGTTCCCAAGACGACAGGTAGACGAGAGCAAGAAGAAGACGGAATAAAGAAGAGAAGAGAGGGGGGGGGGGGGATGCAGAGGTTGAAGGCTTCATCATCATCATCAATGGCGACTATTATCAAGCGTAACTTCACAATAAGATCATCATCTCGTTTCTTCGATACATTTAAAAGAGGACTTTGCTCTCACTCTCAACCTTCCTCCAATGCCGATGACGTGGTTTTAGTCGAAGGAAAAGGACATTGTCGAACAGCCATTCTCAACAGGCCTCCTTCTCTCAACGCCCTCAACACTTCTATGGGTGCTAGGTTGCAAAAGTTGTACAAATGCTGGGAAGATGATCCCAATGTCGGTTTTGTGATGATGAAGGGCAGTGGCAGGGCTTTTTGTGCTGGTGGAGACATTGTTTCTCTTTATAATCAACTCAATGCAGGAAGAATAGAAGACTCAAAAGAGTTTTTTCGAACATTATATACATATATATACATACTTGGAACTTATTTGAAGCCACATGTGGCTCTTTTGAATGGCATTACTATGGGTGGCGGTGGAGGTGTTTCAATCCCAGAACAATTCGTGTTGCAACAGACAAAACTTAAGTATTATGGGAGTATTTGGCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53249.p1 GENE.R_Transcript_53249~~R_Transcript_53249.p1 ORF type:5prime_partial len:211 (+),score=31.28,ECH_2|PF16113.1|8.3e-37,ECH_1|PF00378.16|9.1e-13 R_Transcript_53249:2-634(+)
LTPVPKTTGRREQEEDGIKKRREGGGGMQRLKASSSSSMATIIKRNFTIRSSSRFFDTFKRGLCSHSQPSSNADDVVLVEGKGHCRTAILNRPPSLNALNTSMGARLQKLYKCWEDDPNVGFVMMKGSGRAFCAGGDIVSLYNQLNAGRIEDSKEFFRTLYTYIYILGTYLKPHVALLNGITMGGGGGVSIPEQFVLQQTKLKYYGSIWL*

Click here to download the sequence:
Link to NCBI Protein BLAST