Transcript Information: R_Transcript_53252.p2


Annotated TAIR IDAT4G31810.1
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15387365-15390290 | Reverse length=409
E-Value5E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2594573133426
Replicate 20
Replicate 31.022622214114
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.32413590393548
Condition 3: 24 Hour
Replicate 10.20498042167593
Replicate 20.39384390876031
Replicate 31.5634074776355


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53252.p2 GENE.R_Transcript_53252~~R_Transcript_53252.p2 ORF type:3prime_partial len:112 (+),score=22.34,ECH_2|PF16113.1|1.1e-17 R_Transcript_53252:903-1235(+)
ATGATTTTTCTGTTGTTGACTTCCCTGCAACAGTTTTCTGATGTTGTCGCTCCTGATAATATGAGCGTACTTCGCAGGTTGGAGACAGTGAATAAATGTTTTGGCTTTGACTCCGTTGAAAAAATAATTGATTCACTGGAAGATGAAGCAACCAAGACTGATCATGCCTGGTGTGCTTCCACTATAAAGAGGTTACAGGAAGTGCCACCATTGAGCTTGGAAGTTTCATTGAGATCAATACGGGAAGGAAGGTATCAGACTCTTGACCAGTGCCTGGTTCGTGAGTATCGCATGTCACTTCAGGGCATCTCTGGAAGGATTTCAAATGACTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53252.p2 GENE.R_Transcript_53252~~R_Transcript_53252.p2 ORF type:3prime_partial len:112 (+),score=22.34,ECH_2|PF16113.1|1.1e-17 R_Transcript_53252:903-1235(+)
MIFLLLTSLQQFSDVVAPDNMSVLRRLETVNKCFGFDSVEKIIDSLEDEATKTDHAWCASTIKRLQEVPPLSLEVSLRSIREGRYQTLDQCLVREYRMSLQGISGRISNDF

Click here to download the sequence:
Link to NCBI Protein BLAST