Transcript Information: R_Transcript_53254.p1


Annotated TAIR IDAT3G60510.3
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22357141-22360003 | Reverse length=426
E-Value1E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.58691192780446
Replicate 20.20253665996429
Replicate 30.44193062886468
Condition 2: 8 Hour
Replicate 10.55112879302481
Replicate 21.7255985986767
Replicate 30.58365307461051
Condition 3: 24 Hour
Replicate 10.9596511059812
Replicate 20.78008954275354
Replicate 30.98529860326869


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53254.p1 GENE.R_Transcript_53254~~R_Transcript_53254.p1 ORF type:complete len:311 (+),score=52.26,ECH_2|PF16113.1|3.5e-75,ECH_1|PF00378.16|1.8e-23 R_Transcript_53254:46-933(+)
ATGGCGACTATTATCAAGCGTAACTTCACAATAAGATCATCATCTCGTTTCTTCGATACATTTAAAAGAGGACTTTGCTCTCACTCTCAACCTTCCTCCAATGCCGATGACGTGGTTTTAGTCGAAGGAAAAGGACATTGTCGAACAGCCATTCTCAACAGGCCTCCTTCTCTCAACGCCCTCAACACTTCTATGGGTGCTAGGTTGCAAAAGTTGTACAAATGCTGGGAAGATGATCCCAATGTCGGTTTTGTGATGATGAAGGGCAGTGGCAGGGCTTTTTGTGCTGGTGGAGACATTGTTTCTCTTTATAATCAACTCAATGCAGGAAGAATAGAAGACTCAAAAGAGTTTTTTCGAACATTATATACATATATATACATACTTGGAACTTATTTGAAGCCACATGTGGCTCTTTTGAATGGCATTACTATGGGTGGCGGTGGAGGTGTTTCAATCCCAGGAACATTTCGTCTTGCAACAGACAAAACTGTTTTTGCGACCCCGGAAACTATCATTGGGTTTCATCCTGATGCTGGTGCCTCTTTCTATCTTTCACATTTACCTGGATACATTGGGGAGTATTTGGCTCTGACTGGCGAAAAACTCAGTGGTGCTGAAATGCTTGCTTGTGGGCTCGCAACACATTTTTCACTTAGTGCTAAGCTTCCTCAAATTGAAGCACATTTAGGCAGTGTGGTCACAGATGATTTTTCTGTTGTTGAGACTTCCCTGCAACAGTTTTCTGATGTTGTCGCTCCTGATAATATGAGCGTACTTCGCAGGACTAAGAAACAGGAAACTGAGATACTAGAAGCAAGGCATTCTGTAACTGCTTCAATATCTACTGGTATTATTAAACAAATAAGTAATTCCTATCTTCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53254.p1 GENE.R_Transcript_53254~~R_Transcript_53254.p1 ORF type:complete len:311 (+),score=52.26,ECH_2|PF16113.1|3.5e-75,ECH_1|PF00378.16|1.8e-23 R_Transcript_53254:46-933(+)
MATIIKRNFTIRSSSRFFDTFKRGLCSHSQPSSNADDVVLVEGKGHCRTAILNRPPSLNALNTSMGARLQKLYKCWEDDPNVGFVMMKGSGRAFCAGGDIVSLYNQLNAGRIEDSKEFFRTLYTYIYILGTYLKPHVALLNGITMGGGGGVSIPGTFRLATDKTVFATPETIIGFHPDAGASFYLSHLPGYIGEYLALTGEKLSGAEMLACGLATHFSLSAKLPQIEAHLGSVVTDDFSVVETSLQQFSDVVAPDNMSVLRRTKKQETEILEARHSVTASISTGIIKQISNSYLH*

Click here to download the sequence:
Link to NCBI Protein BLAST