Transcript Information: R_Transcript_53255.p1


Annotated TAIR IDAT3G60510.3
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22357141-22360003 | Reverse length=426
E-Value5.5E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.047844788382
Replicate 28.8907779274755
Replicate 311.508169605723
Condition 2: 8 Hour
Replicate 114.176027074721
Replicate 215.406540598712
Replicate 316.935713258256
Condition 3: 24 Hour
Replicate 113.895514900979
Replicate 210.394464118286
Replicate 312.619466099383


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53255.p1 GENE.R_Transcript_53255~~R_Transcript_53255.p1 ORF type:complete len:418 (+),score=75.10,ECH_2|PF16113.1|5.9e-111,ECH_1|PF00378.16|8.2e-23 R_Transcript_53255:46-1254(+)
ATGGCGACTATTATCAAGCGTAACTTCACAATAAGATCATCATCTCGTTTCTTCGATACATTTAAAAGAGGACTTTGCTCTCACTCTCAACCTTCCTCCAATGCCGATGACGTGGTTTTAGTCGAAGGAAAAGGACATTGTCGAACAGCCATTCTCAACAGGCCTCCTTCTCTCAACGCCCTCAACACTTCTATGGGTGCTAGGTTGCAAAAGTTGTACAAATGCTGGGAAGATGATCCCAATGTCGGTTTTGTGATGATGAAGGGCAGTGGCAGGGCTTTTTGTGCTGGTGGAGACATTGTTTCTCTTTATAATCAACTCAATGCAGGAAGAATAGAAGACTCAAAAGAGTTTTTTCGAACATTATATACATATATATACATACTTGGAACTTATTTGAAGCCACATGTGGCTCTTTTGAATGGCATTACTATGGGTGGCGGTGGAGGTGTTTCAATCCCAGGAACATTTCGTCTTGCAACAGACAAAACTGTTTTTGCGACCCCGGAAACTATCATTGGGTTTCATCCTGATGCTGGTGCCTCTTTCTATCTTTCACATTTACCTGGATACATTGGGGAGTATTTGGCTCTGACTGGCGAAAAACTCAGTGGTGCTGAAATGCTTGCTTGTGGGCTCGCAACACATTTTTCACTTAGTGCTAAGCTTCCTCAAATTGAAGCACATTTAGGCAGTGTGGTCACAGATGATTTTTCTGTTGTTGAGACTTCCCTGCAACAGTTTTCTGATGTTGTCGCTCCTGATAATATGAGCGTACTTCGCAGGTTGGAGACAGTGAATAAATGTTTTGGCTTTGACTCCGTTGAAAAAATAATTGATTCACTGGAAGATGAAGCAACCAAGACTGATCATGCCTGGTGTGCTTCCACTATAAAGAGGTTACAGGAAGTGCCACCATTGAGCTTGGAAGTTTCATTGAGATCAATACGGGAAGGAAGGTATCAGACTCTTGACCAGTGCCTGGTTCGTGAGTATCGCATGTCACTTCAGGGCATCTCTGGAAGGATTTCAAATGACTTTCGAGAGGGTGTACGGGCACGCATGGTGGATAGGGACTTCTCTCCAAAGTGGGACCCACCGAGCTTAGATGGTGTCTCCAAAGATATGGTGGATGAATATTTCTCCCCACTCAGTCATTCTGAACCGGACTTAGAATTACCAACAAAGCTGCGAGAAGCGTTTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53255.p1 GENE.R_Transcript_53255~~R_Transcript_53255.p1 ORF type:complete len:418 (+),score=75.10,ECH_2|PF16113.1|5.9e-111,ECH_1|PF00378.16|8.2e-23 R_Transcript_53255:46-1254(+)
MATIIKRNFTIRSSSRFFDTFKRGLCSHSQPSSNADDVVLVEGKGHCRTAILNRPPSLNALNTSMGARLQKLYKCWEDDPNVGFVMMKGSGRAFCAGGDIVSLYNQLNAGRIEDSKEFFRTLYTYIYILGTYLKPHVALLNGITMGGGGGVSIPGTFRLATDKTVFATPETIIGFHPDAGASFYLSHLPGYIGEYLALTGEKLSGAEMLACGLATHFSLSAKLPQIEAHLGSVVTDDFSVVETSLQQFSDVVAPDNMSVLRRLETVNKCFGFDSVEKIIDSLEDEATKTDHAWCASTIKRLQEVPPLSLEVSLRSIREGRYQTLDQCLVREYRMSLQGISGRISNDFREGVRARMVDRDFSPKWDPPSLDGVSKDMVDEYFSPLSHSEPDLELPTKLREAFS*

Click here to download the sequence:
Link to NCBI Protein BLAST