Transcript Information: R_Transcript_53330.p1


Annotated TAIR IDAT1G01060.1
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)LHY, LHY1
Annotation TypeOrtholog
Chromosome Positionchr1:33992-37061 | Reverse length=645
E-Value3.6E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1156.67947024915
Replicate 2131.96458545433
Replicate 3156.47778182237
Condition 2: 8 Hour
Replicate 130.673509197427
Replicate 233.148496459163
Replicate 334.071063718537
Condition 3: 24 Hour
Replicate 1128.12938358165
Replicate 294.181916343546
Replicate 3118.31191722647


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53330.p1 GENE.R_Transcript_53330~~R_Transcript_53330.p1 ORF type:complete len:740 (+),score=195.97,Myb_DNA-binding|PF00249.27|6.5e-13 R_Transcript_53330:961-3180(+)
ATGGACGCTGCTTACTCTTCCGGTGAAGAGCTAGTTATCAAGACGAGAAAACCTTATACAATTACCAAGCAACGAGAGCGATGGACAGAGGAGGAGCACAGTAGGTTTTTGGAGGCCTTGAAACTATATGGACGAGCTTGGCAGCGGATAGAAGAACATATTGGGACAAAGACCGCTGTCCAGATCAGAAGTCATGCGCAGAAGTTCTTTTCAAAGTTGGAAAAGGAGGCTCTTGTTAAGGGTGTTCCAGTGGGGCAAGCAATCGACATAGAAATTCCCCCTCCACGTCCTAAAAGGAAACCAAGCAATCCTTACCCCCGCAAGACTGGTGTTACAAGTTCCCTGAATACACAGGTCAGAGGAAAGGACGGGAAGCAAGCACCTGCAGGTTCTTCACATAGTGCAAGCCAAGTTTTAGACTTGGAGAAAGAACCACCACCTGAGAAAACTGCTTGTGATGATGAGAGAAAAGATGCTAAGGGAGCCTCCGGCGATGATAAGAGCTCAGAAACCTTTTCCCTGTTCCAAGAAGCACCCTCCACTATCACAGCAGCCACTATTGAGAACTCTGCCACAACCACAGAAGCAACAGGAAAGTCCTGCAACTTAAGTGAACCTGCACCAATTAAACCGCAGGTGGTCAATATTGAAAGATGTGATTCTCGTGCGGCTGATAGATCAAATAAAAATCATAAGCCAGAAAAACCCGGTGTTGCGGACACTGCTCAGAATGACACAGAAAATCAAATGCATGCTGCTAAGAACTTTCCTAGGCATGCTCCTGTTCAGATTCTTGATGGAAGCCCAGGAGCTTGCAGTCAGGCTTTTTCCTCAGATGTTTCATATCAAGAATCTGCATTTCATCATATGGGGATCCCAGGGCATCCTGTATTATTTGGAAATCCAGGAGTTTCAGCTCCTGTGGAAAGTCAAAATAGCACATCAAGATCCACTAATCACCATATGTTTCCAAGTTTCCATCCTCCATTTACTGCATATCCTAACACCCAAGAAGACTACTCTTCATTTCTGCAGATGTCCTCCACCTTTTCAAGCCTGATTGTGTCTGCTCTTCTCCAGAATCCAGCTGCACATGCTGCAGCAAGTTTTGCAGCTTCCTTTTGGCCCTGCACGAATATTGAAAATTCAGCTAACCCTCCTGCTGGTTTAAATGGGGGATTCCCACCACGACCCATGAATACAGCTCCAAGCATGGCAGCAATCGCTGCAGCCACAGTAGCAGCTGCTACTGCCTGGTGGGCAGCACATGGACTCCTGCCCTTGTGTGCTCCACTGCATGCTGGCTTCACTTGTCCTCCTCCCTCTGCTACTGCTCCAGTAACTAATTCTGCGCAAACACAAGCACCTAATGAAGAAAGAGAAGAGAACAATTTCCAAAACCCGGAATCACAGGATCAACAAGCAGATCAGGAACTCTCTGAAGCTTTACAGCCACAGCATTCAGCATCCAAATCTCCAGCAACGTCATCGTCTGATTCAGGGAACAGTTCAGGTGCAAAGATGGAAGTTGGGATAACAGCCAATAATGATGAGAAAAAGGTCTCTGTAGTGACTGAGCAAAAGGAACTAAGCAAGGGGAAAAACAAGAAACAGGTAGATCGTTCGTCCTGTGGATCCAACACACCTTCAGGAAGTGATGTTGAGACTGATGCTCTGCAGAAGGATGATGAAGCTAAGGAAGAATCCATGGGACCTAATAATATTCCTCCTGTTTGTGAAACTAATCGTCGAAATCGAATTGCCAGCAACTTAAATGAAAGCTGGAAGGAGGTTTCAGAGGGGGGGCGCCTGGCATTTCAAGCACTTTTCTCTAGAGAGGTACTGCCCCAAAGCTTTTCACCAACACATGATGTTAGTAATCTGGACCAGGAGATGAATGACATTGTCGAGGAAAATAGGCAAGGTGCAGTAAAAAGCAATGAAGAGGCATCACAATTGGACCTTAATAGCAATACATGGGAATCTTGTTCGGGTGACCAAGGCTTAGAGAAAAATGGATTAAGAGAGGAGGAGAATGGAAAAGATCAACTCCTGACAATTGGTCTTGCTCAAGGGAAGCTAAGAGCTCGCAGAACAGGTTTTAAGCCATATAAGAGGTGCTCTGTGGAGGCCAGCAGGGAGAGCAGGGTGAACTCCAGCAGTCAAGAGCAGGAAAAATGTGCCAAGAGATTACGCTTGGAAGGGGAGGCTTCAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53330.p1 GENE.R_Transcript_53330~~R_Transcript_53330.p1 ORF type:complete len:740 (+),score=195.97,Myb_DNA-binding|PF00249.27|6.5e-13 R_Transcript_53330:961-3180(+)
MDAAYSSGEELVIKTRKPYTITKQRERWTEEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPVGQAIDIEIPPPRPKRKPSNPYPRKTGVTSSLNTQVRGKDGKQAPAGSSHSASQVLDLEKEPPPEKTACDDERKDAKGASGDDKSSETFSLFQEAPSTITAATIENSATTTEATGKSCNLSEPAPIKPQVVNIERCDSRAADRSNKNHKPEKPGVADTAQNDTENQMHAAKNFPRHAPVQILDGSPGACSQAFSSDVSYQESAFHHMGIPGHPVLFGNPGVSAPVESQNSTSRSTNHHMFPSFHPPFTAYPNTQEDYSSFLQMSSTFSSLIVSALLQNPAAHAAASFAASFWPCTNIENSANPPAGLNGGFPPRPMNTAPSMAAIAAATVAAATAWWAAHGLLPLCAPLHAGFTCPPPSATAPVTNSAQTQAPNEEREENNFQNPESQDQQADQELSEALQPQHSASKSPATSSSDSGNSSGAKMEVGITANNDEKKVSVVTEQKELSKGKNKKQVDRSSCGSNTPSGSDVETDALQKDDEAKEESMGPNNIPPVCETNRRNRIASNLNESWKEVSEGGRLAFQALFSREVLPQSFSPTHDVSNLDQEMNDIVEENRQGAVKSNEEASQLDLNSNTWESCSGDQGLEKNGLREEENGKDQLLTIGLAQGKLRARRTGFKPYKRCSVEASRESRVNSSSQEQEKCAKRLRLEGEAST*

Click here to download the sequence:
Link to NCBI Protein BLAST