Transcript Information: R_Transcript_53344.p1


Annotated TAIR IDAT5G03260.1
Annotated Gene Namelaccase 11
Annotated Gene Symbol(s)LAC11
Annotation TypeOrtholog
Chromosome Positionchr5:777198-779338 | Reverse length=557
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.202776112046
Replicate 22.7871195242874
Replicate 33.9326611448262
Condition 2: 8 Hour
Replicate 12.5569310298893
Replicate 22.7703747413858
Replicate 34.3049837577555
Condition 3: 24 Hour
Replicate 13.6569958415812
Replicate 22.029864535062
Replicate 34.2225837360563


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53344.p1 GENE.R_Transcript_53344~~R_Transcript_53344.p1 ORF type:complete len:565 (+),score=50.55,Cu-oxidase|PF00394.18|3.6e+02,Cu-oxidase|PF00394.18|9.4e-44,Cu-oxidase|PF00394.18|64,Cu-oxidase_2|PF07731.10|0.79,Cu-oxidase_2|PF07731.10|3.7,Cu-oxidase_2|PF07731.10|3.3e-40,Cu-oxidase_3|PF07732.11|1.8e-42,Cu-oxidase_3|PF07732.11|3.2e+02,Cu-oxidase_3|PF07732.11|8.7e+03,Cu-oxidase_3|PF07732.11|32 R_Transcript_53344:58-1752(+)
ATGGCGAGCTCAGACAATAATTTTCATCATGTTCATACAAAATGTCTCATTTTCACCATCCTAGCTTTTCTCTTCGTTCCGCTTGAAGCCGCTGTGAAGACGTACCAATTTGATATTCAAATGAAAAACGTGAGCAGGCTTTGTCACGCAAAACCAATTGTGACGGTGAATGGGATGTATCCTGGACCAACTGTTTATGCGACGGAAGGGGATAGAGTTATAATTAATGTTACTAACCATGCACAATATAACATGTCTATTCATTGGCATGGTTTAAAACAATATCGAAATGGTTGGGCGGATGGACCTGCATATATAACTCAATGTCCGATCCAAACTGGAAACAGCTACACCTACGACTTCAATGTCACAGGCCAAAGGGGAACTCTATGGTGGCACGCGCATATTCTTTGGCTAAGGGCAACTGTTTTCGGGGCCTTGGTCGTCTTGCCGAAACCAGGGACTCCTTATCCATTTCCAAAGCCTCACATGGAAGCTAACTTAGTCTTTGGAGAGTGGTGGCACAAAGATGTTGAGCTAATTGAAAAGCAAGGCAATGACATGGGATTGCCACCAAATATGTCTGATGCTCATACAATCAACGGAAAGCCAGGACCACTATTTCCTTGCTCTGAGAAGCACACTTACGCCTTGGAGGTTGAGAGAGGGAAGACATACCTGTTAAGAATCGTCAATGCTGCCCTCAATGACGAGCTCTTCTTTGCAATCGCTGGTCACAAGATGATCGTAGTGGAGGTTGATGCAGTCTATGTCAAGCCCTTCACCACCGAAACCATTCTCATAGCCCCGGGCCAAACTACAAACGTTTTAGTCCAAGCAAAACAAAACCCTGGCCGTTACTTCATGGCCACAAGGACCTTCATGGACGCACCTATCCCAGTCGACAACAAGACGGCCACGGCCATACTACAATACAAAGGTGTACCAACCACCATAATTCCAACCTTCCCTCAGCTCCCAGCACCAAACGACACCGCCTTGTCGTTGAGCTACAACAAGAAGATCAGGAGCCTCAACACGGCTCAATATCCGGCCAATGTGCCTTTGAAGGTGGATAGAAGATTGTTTTACACTATCGGTCTAGGAGCAAACCCTTGCCCTGCATGTCTCAATGGTACTCGCCTTACGGCCTCCTTGAACAACATTACCTTTGCAATGCCAAAAACAGCGCTGTTACAGGCTCATTACTTCAACATCTCTGGTGTCTACAAGACTGATTTCCCTGACAAACCCCCTAAGCCGTTTAACTACACCGGAGCTCCGCTCACCGCTAACCTTAGGACAGTCCAAGGAACAAGGATCAATAAGATTGCCTTCAATTCCACCGTTGAGCTGGTATTGCAGGACACCAACTTGCTAACGGTAGAGTCTCATCCGTTTCACCTTCATGGATATAACTTCTTTGTGGTTGGGACTGGGATCGGTAACTTTGATCCGGCCAAGGACCCTGCTAAGTTTAATTTGGTTGATCCTCCTGAGAGGAACACCGTTGGTGTCCCCACTGGTGGTTGGACCGCTATCCGGTTTAGAGCTGATAACCCAGGTGTATGGTTTATGCATTGTCATTTGGAGCTGCATACAGGATGGGGATTGAAGACGGCATTTGTGGTGGAAAATGGACCTGGACCACAATATTCTGTGTTGCCTCCACCTAAAGATCTTCCACCATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53344.p1 GENE.R_Transcript_53344~~R_Transcript_53344.p1 ORF type:complete len:565 (+),score=50.55,Cu-oxidase|PF00394.18|3.6e+02,Cu-oxidase|PF00394.18|9.4e-44,Cu-oxidase|PF00394.18|64,Cu-oxidase_2|PF07731.10|0.79,Cu-oxidase_2|PF07731.10|3.7,Cu-oxidase_2|PF07731.10|3.3e-40,Cu-oxidase_3|PF07732.11|1.8e-42,Cu-oxidase_3|PF07732.11|3.2e+02,Cu-oxidase_3|PF07732.11|8.7e+03,Cu-oxidase_3|PF07732.11|32 R_Transcript_53344:58-1752(+)
MASSDNNFHHVHTKCLIFTILAFLFVPLEAAVKTYQFDIQMKNVSRLCHAKPIVTVNGMYPGPTVYATEGDRVIINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIQTGNSYTYDFNVTGQRGTLWWHAHILWLRATVFGALVVLPKPGTPYPFPKPHMEANLVFGEWWHKDVELIEKQGNDMGLPPNMSDAHTINGKPGPLFPCSEKHTYALEVERGKTYLLRIVNAALNDELFFAIAGHKMIVVEVDAVYVKPFTTETILIAPGQTTNVLVQAKQNPGRYFMATRTFMDAPIPVDNKTATAILQYKGVPTTIIPTFPQLPAPNDTALSLSYNKKIRSLNTAQYPANVPLKVDRRLFYTIGLGANPCPACLNGTRLTASLNNITFAMPKTALLQAHYFNISGVYKTDFPDKPPKPFNYTGAPLTANLRTVQGTRINKIAFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPAKDPAKFNLVDPPERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFVVENGPGPQYSVLPPPKDLPPC*

Click here to download the sequence:
Link to NCBI Protein BLAST