Transcript Information: R_Transcript_53348.p1


Annotated TAIR IDAT1G78070.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29355219-29358368 | Forward length=449
E-Value1.3E-213
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.508356444554
Replicate 228.393731153686
Replicate 335.423288307974
Condition 2: 8 Hour
Replicate 138.433509537448
Replicate 248.967500740824
Replicate 352.54010500247
Condition 3: 24 Hour
Replicate 140.684721669349
Replicate 229.593132182294
Replicate 338.188041721654


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53348.p1 GENE.R_Transcript_53348~~R_Transcript_53348.p1 ORF type:complete len:474 (+),score=97.59,WD40|PF00400.28|44,WD40|PF00400.28|1.3e+03,WD40|PF00400.28|0.011,WD40|PF00400.28|1.6e+04 R_Transcript_53348:225-1646(+)
ATGGCTCACTTTCCGTTCCAGAACGACGAACTTGAATTGGTAGATGAGTATGAGTACGATTATGATGACATGGCTGAATTCCAAGATAATGAGGAATTCTGGTTACCAGACAGAGAAAGAGAAAGAGAAAACTCAAGCCCAAGAGCAAAGAACAGGAGTGATGATCCATTTGATTCTGATTTAGATGAAGAGGAGGATGACCTGCTCTTTGAAGCTGTAAAGTCAAAAACAGATACAACAGCAGTAGAAGCAAGGAACGGGAAAGACATACAGGGAATACCATGGGAGAGGCTTAATTTCACTAGAAACAAGTACCGGGAGACTCGTTTGAAGCATTACAAAAACTATCTCAATCTCCCTTCTTCTTCTCCTTCTCATGACTTTCACAAGGTTTGCGAGCAAGTTGAGAAAGGCCACACCTTTTATGATTTTCATTTCAACACCAGGCTTGTTAAGTCTACCATCGTCCATTTTCAGTTGAGGAATCTGCTTTGGGCAACATCCAAACATGATCTTTACCTTGTGCAAAACTATTCTGTTATGCATTGGTCCGCTGTGCTTAAGAGAGGCAAAGAAGTGCTTAATGTGGCAAAACCAATTGTGCCTACTGCGAAATCCCTTCGATCTGTCCCTGTGGCTTTATCTAGGGTGCAGATTAGCACCATGAGTGTCAAGGACAATCTTTTAGTAGCTGGTGGTTTCCATGGGGAGCTCATCTGCAAGCACCTGAATCAGCAACAAGTGGCATTTAGTACAAAGTTAACGACTGAGGAGAATGCTATCACTAATGCAGTAGATATATATCACTGTCCCAGCGGTGGACAGAGGGTAATGACTGGAAACAATGATGCCCATGTTAGAATCTTTGATGCTGCTAACTTTGTTTGCCTAAATCGTTTCTGCTTCCCTTGGTCGGTCAATAATCTCTCTGTAAGTCCAGATGGCAAGTTAATGGCTGTCCTTGGTGACAGTGCAGAGTGTTTGGTGGGTGATTCTCAGACAGGAAAAGTTGTTAGTACGCTGAAAGGGCACATGGATTATTCGTTTGCTTCAGCTTGGCACCTTGATGGGCGAATCTTGGCTACTGGGAATCAGGATATGACATGCAGACTTTGGGATGTGAGGAACATGTCTCAGTCCTTGGAGGTGCTCAAGGGAAGGATGGGTGCCATTAGAGCTTTGAAGTTCACCTCAGATGGGCGATTCATGGCCATGGCCGAACCAGCTGACTTTGTGCATATATTTGATACAAAATATGGGTACCAAAAGGAGCAAGAAATCGATCTGTTTGGTGAGATAGCAGGGATATCCTTCAGCCCCGACACAGAAGCCCTGTTTGTTGGGGTTGCTGATAGAAATTACGGTAGTGTCTTGGAGTTTCATAGAAGACATAGTAATGAATACCTGGAGGCCATGTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53348.p1 GENE.R_Transcript_53348~~R_Transcript_53348.p1 ORF type:complete len:474 (+),score=97.59,WD40|PF00400.28|44,WD40|PF00400.28|1.3e+03,WD40|PF00400.28|0.011,WD40|PF00400.28|1.6e+04 R_Transcript_53348:225-1646(+)
MAHFPFQNDELELVDEYEYDYDDMAEFQDNEEFWLPDRERERENSSPRAKNRSDDPFDSDLDEEEDDLLFEAVKSKTDTTAVEARNGKDIQGIPWERLNFTRNKYRETRLKHYKNYLNLPSSSPSHDFHKVCEQVEKGHTFYDFHFNTRLVKSTIVHFQLRNLLWATSKHDLYLVQNYSVMHWSAVLKRGKEVLNVAKPIVPTAKSLRSVPVALSRVQISTMSVKDNLLVAGGFHGELICKHLNQQQVAFSTKLTTEENAITNAVDIYHCPSGGQRVMTGNNDAHVRIFDAANFVCLNRFCFPWSVNNLSVSPDGKLMAVLGDSAECLVGDSQTGKVVSTLKGHMDYSFASAWHLDGRILATGNQDMTCRLWDVRNMSQSLEVLKGRMGAIRALKFTSDGRFMAMAEPADFVHIFDTKYGYQKEQEIDLFGEIAGISFSPDTEALFVGVADRNYGSVLEFHRRHSNEYLEAMF*

Click here to download the sequence:
Link to NCBI Protein BLAST