Transcript Information: R_Transcript_53396.p1


Annotated TAIR IDAT5G02250.1
Annotated Gene NameRibonuclease II/R family protein
Annotated Gene Symbol(s)EMB2730, RNR1, ATMTRNASEII
Annotation TypeOrtholog
Chromosome Positionchr5:454902-459063 | Forward length=803
E-Value3.6E-268
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.04319073301
Replicate 26.2339531132926
Replicate 39.2099254252572
Condition 2: 8 Hour
Replicate 15.8059267400685
Replicate 28.2988839822957
Replicate 38.3834242865292
Condition 3: 24 Hour
Replicate 19.1831228910816
Replicate 27.5488102594553
Replicate 38.6196940107163


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53396.p1 GENE.R_Transcript_53396~~R_Transcript_53396.p1 ORF type:5prime_partial len:485 (+),score=104.01,RNB|PF00773.15|7e-68 R_Transcript_53396:2-1456(+)
GACACCTGCTGCAGTGAAGTTCAGAAGAGAACGGCTGGGACGGTTCTCATGGCTATGGGGTTGGCAAAAACAGCAAGTGCAGCATTAAATCTTCTCGTAGATATTGGTTATTTTCCAGTACATGTTAATCTTGAGCTGTTGAAGCTGAACATTCAAACTGACCACTCGGAGGAGATTGTATCGGCTGCTGAAGATTTGTTGTCAGAACCTTGTGATATTGATGAGATTCACAGGATCGATCTTACTCACTTGAAGGTCTATGCAATTGATGTTGATGAGGCTGATGAGCTGGATGACGCTGTCAGTGCCACAAGGTTGCAGGATGGCCGGATCAATGTCTGGATACATGTTGCAGATCCAACCTGCCTGGTTCAACCTGGTAGCATTCTAGACAAGGAGGCAATGAGTAGAGGTACAACAGTTTTTCTGCCTACAGCAACTTATCCTATGTTTCCAGAAAGGCTTGCCATGGAAGCGATGAGTCTGCAGCAAGGAAAAAGTTGCAATGCTGTCACAGTCTCTGTTGTGTTGAATTCTGACGGCAGCATTGCAGAGTATCAAGTTGATAACACAATTATCAAACCTACCTACATGCTCACATATGAGAGTGCATCTGAGCTCCTTCATTTGAATCTCGAAGAGGAGGGTGAGTTAAAGATTCTGTCTGAGGCTGCATCTCTACGCTTACAGTGGCGTAGACAACAGGGTGCTATCGATACCACTACTTTAGAAACACGCATCAAAGTGGCAAATCCAGATGATCCAGAGCCAGAGATCAATGTTTATGTGGAAAATCAGGCTGACCCTGCAATGCGCCTTGTTTCAGAAATGATGATTCTTTGTGGGGAGGTTATTGCTACATTTGGATCTCACAACAACTTATCTTTACCTTATAGAGGACAGCCTCAATCAAATATAGACATATCTGCATTTTCTCATCTTCCTGAAGGACCAGTTCGGAGCGCTGCTGTTGTTAAAACCATGCGAGCTGCGGAATTTGATTTTAGGAAGCCTATACGTCATGGAGTTTTGGGACTTCCAGGATATGTTCAGTTCACATCTCCTATCCGCAGATATATGGATCTTCTTGCTCATTATCAGGTAAAAGCTTTTATTAGGGGTGACAGTCTACCGTTTTCAGCCGGTCAGCTGGAAGGGATGGCATCAATAGTCAATATGCATCATAGAGTCGCAAGGAAGCTCTATAGTACCAGTCTCCGTTACTGGGTGTTAGAATACCTGAGAAGGCAGCCGAGATGGAAAAAGTTCCGCGCTCTAGTTCTGAGATTCATCAAGGACCGTGTCGCTGCCTTGTTGTTAGTGGAGGTTGGACTTCAAGCTACTGCATGGGTTTTAGTGGGATCCCAGGTTGGAGATGAAATTGAAGTTCAGGTAGAAGAAACTAATCCAAGAGATGATGTTTTGTCCTTGAAGCAGGTTGCCAAAGATAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53396.p1 GENE.R_Transcript_53396~~R_Transcript_53396.p1 ORF type:5prime_partial len:485 (+),score=104.01,RNB|PF00773.15|7e-68 R_Transcript_53396:2-1456(+)
DTCCSEVQKRTAGTVLMAMGLAKTASAALNLLVDIGYFPVHVNLELLKLNIQTDHSEEIVSAAEDLLSEPCDIDEIHRIDLTHLKVYAIDVDEADELDDAVSATRLQDGRINVWIHVADPTCLVQPGSILDKEAMSRGTTVFLPTATYPMFPERLAMEAMSLQQGKSCNAVTVSVVLNSDGSIAEYQVDNTIIKPTYMLTYESASELLHLNLEEEGELKILSEAASLRLQWRRQQGAIDTTTLETRIKVANPDDPEPEINVYVENQADPAMRLVSEMMILCGEVIATFGSHNNLSLPYRGQPQSNIDISAFSHLPEGPVRSAAVVKTMRAAEFDFRKPIRHGVLGLPGYVQFTSPIRRYMDLLAHYQVKAFIRGDSLPFSAGQLEGMASIVNMHHRVARKLYSTSLRYWVLEYLRRQPRWKKFRALVLRFIKDRVAALLLVEVGLQATAWVLVGSQVGDEIEVQVEETNPRDDVLSLKQVAKDS*

Click here to download the sequence:
Link to NCBI Protein BLAST