Transcript Information: R_Transcript_53450.p1


Annotated TAIR IDAT1G18950.1
Annotated Gene NameDDT domain superfamily
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6546539-6551549 | Forward length=750
E-Value3.8E-274
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.117517054724
Replicate 210.088751592789
Replicate 311.900018277667
Condition 2: 8 Hour
Replicate 19.821628279675
Replicate 212.644175525796
Replicate 315.269600020493
Condition 3: 24 Hour
Replicate 116.690773499807
Replicate 213.577192798935
Replicate 316.583441991187


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53450.p1 GENE.R_Transcript_53450~~R_Transcript_53450.p1 ORF type:5prime_partial len:718 (+),score=217.01,DDT|PF02791.13|1.7e-07,DDT|PF02791.13|3.5e+03 R_Transcript_53450:1-2154(+)
ACTGACCCAATTCAGGTTGAGGTAAATACTGCTACTAAGAGTAGCAAAAATGCCAAAAAAGAGAATAGTAATAATAATAATAATAATGTTGTAGTAAGGAGGGAGAGGCCCACCCGGGCCTGCACGGCCCGGCCCGCCAAGTATGTGGACCCACCGGTGATCGAACGGAGGCCGAGGCCGCCCAAGAGAGAGAAAGTGGTGGTGAAGGAGGATGTTGATGAGGAGTATGAAGATGAAGATGAGCAAAAGGAGGAATGTAGGAAGGTGGTGACTTCTTTGGTGAATGCACCTACTCCTGAGCAAATGCCACGCTGGAACTTGAGGTCAATGTGGGAATTGGCTTCTATACTTCATTTCCTCCATGTTTTTAGGCCACTTTTGAACATTACAGCTGAGTTCAGTGCTGAGGAGTTGGAGACTGCATTGCTTAACCCCAATGGTACATTGGGTGATATACATATCCCTTTGCTAAAGGCAATTCCTCCAGTTACTAGAATGGCTTGTGGACGTGACACATGGGTTACTGTACTATGTAGAAAATTGAGAGACTGGTGGCATTGGGTTGCAGAAGGAGAATTACCTATTGTTGCTTCCCATGGGGCTGAGATTGAAGCTTACAGGACTCTTGAACCTGGGGTTCGTGTGGTGATTCTGAAAGCGCTCTGTGATATTCGTGTCGAGCAAGATGACATTCGGAGTTATATTGATAACTCACTCAAACATGGTGTTCAGCTTTCAGCATTTCGTAAAGAGCGGATTGGGGGTGATTCACATGGAATATCTTACTGGTATGAAGATGATGAGCTTATTGGCCATAGGCTATATCGGGAAATCAGGAAAGTTGAGAAAAAGGTTGAGGTGAAGAAGGGAAAGACAAAGGGCTCTCATGTCCTGCCTAGCACTACTTATCAGTGGGAAACAGTGGCAACCAATCTGGATGAATTTGTGGATGTTTCTGAAAAGCTTTTTTTGAGCAAAAACAGAACAGAAACATCCCTTGGGAAGAAACTAAAGAATGATATGCTTCCAGAGATAGAGAAGATCCACAAGAGGAAAGAAAAGTTGCTGAAAAAGCAACAGAGGCAAGCCCTTCTTCTGGATAATTTTGTTAACATGGATGGACTTGCTGCTGGGCGCTCTCTTCGAGATAGAAAACCTGTTACTTACACATTTGATGATTTCGATCGTTCTATCAACGAGGCTATCAAGATAACCAAGCGCAAACAGCCATCCCCAGAGCCTGGATCTAGAAGAGAAGGTGCTAAATCAGAACCTTCTGCAAATGGTAGATGGAATGGCTCTTCACATGGCTCTCTACATGTGTCATTTAGACCTCCTTCTCCTGTTGATTATGATGAAATGGATGAGGATCATAAATCTGGACCGCTGGATCGGAGTAACCGTAGAAGACAAAGACCTCAGAGATATTCTGAGCGAGAATTCGTTGAAGCGCTTTCAGACAATGAGGAAGAGTCTTACAGTGATGATGACATAGTTGGAGAAGCTGTCTATGATGAGGAGTATTTGAGACAGCGTAAACAGAGGAAAAAGGGTTCCAGCAGCTCCGAGGGTGAAGGAGACGAGGAATACCATTGGAGTGATGAAAATGGAGAGGATGAGGTGGAGGAAGAGGATGAGGAAGAGGAAGATTCACTAAGCATGAGTGAAGATAGTGACCAACCAAGAGGAGGTTTTAAAAGACTGGAAGGCCGAACTCGCAGAGGAACTAAATTGAGGTCAGTTGACGAGCTTCAGGTAGGCTTAAGGCGTAGTAAGCGGTCTACAAGAAACCGTATTGATTACCGACAGTACGAGCTCTCAGAATCAGAAAACGAGACAGCTAAACACCATGGAATTGGTAATGCATCTGAGAGGCATTCAGATGCAACTGATAATGCTGAATACTCGATGGAAAGTCAGGATTCTGAGGGTAATGATGAAGAGCAAGGAGGGGGATTTGATCAACCTACTCCCATGGAGGCTGGCAAAGATGAAAATCAATCTCCAACCAAGATGGAGAGCACAAGCCAAGATGATAATGATGGGGTTGGAGAAAGGCGGTTTCTTGACCTCAATGAACTAGCACCTGGTTCCGGTTTTGATGATGGACCAAGTGCTTTAGTGAAGGATGATGATGATGTCAAAGGTGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53450.p1 GENE.R_Transcript_53450~~R_Transcript_53450.p1 ORF type:5prime_partial len:718 (+),score=217.01,DDT|PF02791.13|1.7e-07,DDT|PF02791.13|3.5e+03 R_Transcript_53450:1-2154(+)
TDPIQVEVNTATKSSKNAKKENSNNNNNNVVVRRERPTRACTARPAKYVDPPVIERRPRPPKREKVVVKEDVDEEYEDEDEQKEECRKVVTSLVNAPTPEQMPRWNLRSMWELASILHFLHVFRPLLNITAEFSAEELETALLNPNGTLGDIHIPLLKAIPPVTRMACGRDTWVTVLCRKLRDWWHWVAEGELPIVASHGAEIEAYRTLEPGVRVVILKALCDIRVEQDDIRSYIDNSLKHGVQLSAFRKERIGGDSHGISYWYEDDELIGHRLYREIRKVEKKVEVKKGKTKGSHVLPSTTYQWETVATNLDEFVDVSEKLFLSKNRTETSLGKKLKNDMLPEIEKIHKRKEKLLKKQQRQALLLDNFVNMDGLAAGRSLRDRKPVTYTFDDFDRSINEAIKITKRKQPSPEPGSRREGAKSEPSANGRWNGSSHGSLHVSFRPPSPVDYDEMDEDHKSGPLDRSNRRRQRPQRYSEREFVEALSDNEEESYSDDDIVGEAVYDEEYLRQRKQRKKGSSSSEGEGDEEYHWSDENGEDEVEEEDEEEEDSLSMSEDSDQPRGGFKRLEGRTRRGTKLRSVDELQVGLRRSKRSTRNRIDYRQYELSESENETAKHHGIGNASERHSDATDNAEYSMESQDSEGNDEEQGGGFDQPTPMEAGKDENQSPTKMESTSQDDNDGVGERRFLDLNELAPGSGFDDGPSALVKDDDDVKGE*

Click here to download the sequence:
Link to NCBI Protein BLAST