Transcript Information: R_Transcript_53451.p1


Annotated TAIR IDAT5G64760.1
Annotated Gene Nameregulatory particle non-ATPase subunit 5B
Annotated Gene Symbol(s)RPN5B
Annotation TypeOrtholog
Chromosome Positionchr5:25894027-25896445 | Reverse length=442
E-Value4E-259
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1144.71209762903
Replicate 2127.73797139496
Replicate 3142.05835072105
Condition 2: 8 Hour
Replicate 1113.24101613327
Replicate 2132.64778609182
Replicate 3148.98088397411
Condition 3: 24 Hour
Replicate 1148.42382756593
Replicate 2142.50074456846
Replicate 3153.21393280828


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53451.p1 GENE.R_Transcript_53451~~R_Transcript_53451.p1 ORF type:5prime_partial len:501 (+),score=105.50,PCI|PF01399.23|5.7e-19 R_Transcript_53451:3-1505(+)
AAAAAAAAAAAAAAAAAAAAAAAAAAAGCAAATAGAAACTTGTCTTCTACTCCTCCTCTTCTGAAGCTCTCAGCTATTCCTTCACTTGCATCAAAAAAACCTCGAGGATCCAGTAAATCTCTCTCATCTTCGTTCCCAATCGTTTTCTGTAGTCGATTCGTGATGGCTAGCATGGAGGAGAGCCAACGTAATCTTGAAGCACAAATAGATTCTCTACTGAATGTGGAGAAGCAAATGAGACTTGCCGGAGATGTCCCTGGAACTAGAAAGGCTGCGTGTGACATTCTGCAGCTTTGCTTTGAAGCTCATGCCTGGAAGACTCTGAATGATCAAATTGTTCTTCTTTCAAAGCGTCGAGGTCAACTCAAACAGGCTGTGACGTCAATGGTGCAGCAAGCCATGCAGTACATTGACCAAACACCTGATCTAGATACTCGCATAGAGCTTATTAAAACATTGAACAGTGTTTCTGCCGGGAAGATATATGTTGAGATAGAAAGGGCACGATTAATCAAGAAACTTGCGAAGATAAAGGAGGATCAAGGACTGATTGATGAAGCTGCTGAACTGATGCAAGAGATTGCGGTGGAAACCTTTGGTGCAATGGCAAAAACTGAGAAAATAGCATTTATTCTTGAGCAAGTTCGTCTTTGTTTAGATCGTCAAGATTATGTTAGGGCTCAGATCCTTTCCAGAAAAATTAGTCCCAGGGTTTTTGATGTTGATCCTTCAAAAGAAAAGAAAAAGCCTAAGGAAGGTGATGCTGTTGTAGAAGAGGCTCCTGCCAACATTCCGTCGTTGCCTGAGTTGAAGCGTATTTATTATGAATTGATGATCCGATACTACAAACACCACAACGACTATCTTGAAATATGTCGATGCTATAAGGCTATCTATGAGATTCCATCGGTTAGGGAAGACCAGGAACAGTGGATACCGCTCTTGAGGAAAATCTGCTGGTATTTGGCTCTTGCTCCATTTGATCCTATGCAATCAAGCCTTCTTAACTCGACTTTGGAGGATAAGAATCTCTCTGAAATTCCAAAGTTCAAGTCACTGTTGAAACAGCTGGTGACAATGGAAGTTATCTTTTGGACTGCTCTTTGGAATGAATTCAAGGATGAATTTGATAATGAGAAGAATCTGCTTGGAGGCTCCTTGGGTGAGAAAGCAGCTGAAGACCTAAGGCAAAGGGTCATTGAACATAACATTCTTGTTGTTTCGAAGTACTACTCCAGGATCACCTTGAAGAGACTTGCAGATTTGTTATGCCTTAGTGTACAGGAAGCGGAGAAGCATCTATCTGAAATGGTCGTATCCAATGCCCTGGTTGCGAAGATAGACAGGCCCATGGGAGTAGTATGCTTTCAGGTCGTAAAGGACAGCAATGACATCCTCAACTCATGGTCAATGAACCTGGAGAAGCTGCTTGACCTTGTTGAGAAGAGTTGCCATCAGATACACAAGGAGACGATGGTTCACAAAGCTGCTCTTAAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53451.p1 GENE.R_Transcript_53451~~R_Transcript_53451.p1 ORF type:5prime_partial len:501 (+),score=105.50,PCI|PF01399.23|5.7e-19 R_Transcript_53451:3-1505(+)
KKKKKKKKKANRNLSSTPPLLKLSAIPSLASKKPRGSSKSLSSSFPIVFCSRFVMASMEESQRNLEAQIDSLLNVEKQMRLAGDVPGTRKAACDILQLCFEAHAWKTLNDQIVLLSKRRGQLKQAVTSMVQQAMQYIDQTPDLDTRIELIKTLNSVSAGKIYVEIERARLIKKLAKIKEDQGLIDEAAELMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDVDPSKEKKKPKEGDAVVEEAPANIPSLPELKRIYYELMIRYYKHHNDYLEICRCYKAIYEIPSVREDQEQWIPLLRKICWYLALAPFDPMQSSLLNSTLEDKNLSEIPKFKSLLKQLVTMEVIFWTALWNEFKDEFDNEKNLLGGSLGEKAAEDLRQRVIEHNILVVSKYYSRITLKRLADLLCLSVQEAEKHLSEMVVSNALVAKIDRPMGVVCFQVVKDSNDILNSWSMNLEKLLDLVEKSCHQIHKETMVHKAALKV*

Click here to download the sequence:
Link to NCBI Protein BLAST