Transcript Information: R_Transcript_53589.p1


Annotated TAIR IDAT1G52980.1
Annotated Gene NameGTP-binding family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19737493-19740201 | Forward length=576
E-Value1.4E-285
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.189637281852
Replicate 233.771827124628
Replicate 338.46069522317
Condition 2: 8 Hour
Replicate 141.068884594057
Replicate 246.417562481615
Replicate 350.54919430263
Condition 3: 24 Hour
Replicate 160.491999996808
Replicate 249.672955208584
Replicate 357.247735539098


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53589.p1 GENE.R_Transcript_53589~~R_Transcript_53589.p1 ORF type:complete len:567 (+),score=134.88,NGP1NT|PF08153.8|4.8e-47,MMR_HSR1|PF01926.19|90,MMR_HSR1|PF01926.19|4.2e-14,FeoB_N|PF02421.14|29,FeoB_N|PF02421.14|1.8e-05 R_Transcript_53589:295-1995(+)
ATGTCCTCTTGGCTCCAAAACCCTAGCACGAAACAACCACAAACACCGAAAATAAACTTCACTCTGAGAAGAAAACAAAGAAGCACAACTCTAACTCCAATGGCGAAGAAGAAAGAGAAGAAGCCAAAGCATTCACTAGACGCCAACCGCCGCGATGGCGGTGGTGGAGGTGGCGGTGAAACTCGTAGCGCCGCCACTGTACGGCGACTTAAGATGTACAATACTCGCCCTAAGCGTGACAGCAAAGGAAAGATATTGCGCAATGAGTTTCAGTCCCAAGACTTGCCTTCTACTCGTATTCAAGCTGATCGGCGTTGGTTTGGGAATACTAGAGTTGTCAATCAGAAGGAGCTTGAGTTTTTCCGTGAGGAACTTCAGAGTCGAATGTCAAATAACTACAATGTCATATTGAGGGAAAAGAAGCTTCCCATGTCTCTCTTAAATGACCTCCCCAAGCAACAAAGAGCTCATCTTCTTGATACTGAACCTTTTGCGAATGCATTTGGACCAAAAACAAAGAGGAAACGCCCCAAGCTCGATGCAACAGATTACCAGTCTCTATTGAAGAAAGCTGATAGCTTACAAGAGGAGTTTGAGCAGAAGAAATCAGCTAAGCCATCTACTGAAGGAGATGAAGAAGATGGATTCAGGGATTTGGTTCGTCATACGATGTTTGAGAAAGGTCAAAGCAAACGTATATGGGGTGAACTTTACAAAGTAATTGATTCATCAGATGTGGTGGTTCAGGTTTTGGATGCCAGAGACCCACAAGGCACACGATGTTATCATCTAGAAAAACATTTGAAAGAGAACTGCAAGCACAAGCATATGGTTTTTCTATTAAATAAGTGTGATTTAATTCCAGCTTGGGCTACAAAAGGTTGGCTTAGAGTGCTGTCGAAGGAATACCCCACCCTAGCCTTTCATGCTAGCATCACTAAACCTTTTGGAAAGGGTTCTCTTCTTTCCGTTTTGAGGCAATTTGCTCGGCTAAAGACTGATAAGCAAGCAATATCTGTGGGTTTTGTTGGCTATCCCAATGTTGGGAAATCATCGGTTATCAATACGTTGCGTACTAAAAATGTTTGCAAGGTTGCTCCTATACCAGGGGAGACTAAAGTCTGGCAGTATATTACACTTACTAAGAGGATCTTTCTTATAGACTGCCCTGGAGTTGTTTATCAGAATAGTGACTCCGAGACAGATATTGTACTAAAGGGTGTGGTGAGAGTTGCAAATTTACAGGATGCTGCTGAGCACATTGGAGAAGTCCTGAAACGTGTTAAAAAGGAGCACCTAGAAAGAGCTTACAAGATTAAGGACTGGGAGGATGAGAATGATTTTCTGGTGAAGCTTTGCAAATTATCTGGCAAGCTGTTGAAGGGTGGAGAACCAGATCTGATGACTGCAGCAAAGATGGTCCTTTATGACTGGCAGAGAGGGAAAATACCATTTTTCGTTCCTCCACCACAACAGGAAGACGGTGACTCCGAGGGGACTGCCAATGACAGAGATCAGGCTGATGACAGAGATGAGGTGACGGAGACAGAGGAAGATAAGGAGAAGTCTTTGTCCGCTATGAAAGCAATTGCAGATGTTATTTCATCTCAGCAGAGGGAAGATGTTCCTGTTCAGAGTGACCTGTTTAGCGAAAATGAGCTAAGGGGGGAGCTACCTGAACAAATCGTGAATGAAGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53589.p1 GENE.R_Transcript_53589~~R_Transcript_53589.p1 ORF type:complete len:567 (+),score=134.88,NGP1NT|PF08153.8|4.8e-47,MMR_HSR1|PF01926.19|90,MMR_HSR1|PF01926.19|4.2e-14,FeoB_N|PF02421.14|29,FeoB_N|PF02421.14|1.8e-05 R_Transcript_53589:295-1995(+)
MSSWLQNPSTKQPQTPKINFTLRRKQRSTTLTPMAKKKEKKPKHSLDANRRDGGGGGGGETRSAATVRRLKMYNTRPKRDSKGKILRNEFQSQDLPSTRIQADRRWFGNTRVVNQKELEFFREELQSRMSNNYNVILREKKLPMSLLNDLPKQQRAHLLDTEPFANAFGPKTKRKRPKLDATDYQSLLKKADSLQEEFEQKKSAKPSTEGDEEDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHMVFLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASITKPFGKGSLLSVLRQFARLKTDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNSDSETDIVLKGVVRVANLQDAAEHIGEVLKRVKKEHLERAYKIKDWEDENDFLVKLCKLSGKLLKGGEPDLMTAAKMVLYDWQRGKIPFFVPPPQQEDGDSEGTANDRDQADDRDEVTETEEDKEKSLSAMKAIADVISSQQREDVPVQSDLFSENELRGELPEQIVNED*

Click here to download the sequence:
Link to NCBI Protein BLAST