Transcript Information: R_Transcript_53593.p1


Annotated TAIR IDAT3G17890.1
Annotated Gene Nameunknown protein; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 10; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6127227-6127759 | Forward length=153
E-Value6E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.14108768806
Replicate 223.919835917302
Replicate 324.356531114896
Condition 2: 8 Hour
Replicate 118.906807111164
Replicate 220.308775596267
Replicate 314.475335051701
Condition 3: 24 Hour
Replicate 114.675560316444
Replicate 213.330868506646
Replicate 317.246957174169


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53593.p1 GENE.R_Transcript_53593~~R_Transcript_53593.p1 ORF type:complete len:316 (+),score=97.04 R_Transcript_53593:311-1258(+)
ATGATTGGGGGAGCGAGACGGCAGTTACCATCATGGATGGTGAAGTCTAAGGCTGTTGATAAAGCAAGCAATTCAGAAGCTAAAGAAGCAAAAAATAAAGAAATTGATTCAGAAAAGCTTGATCCCAAACCTTGTGAGACCCAGAACCTGTTGTCGGAAAACGAGTCTCATTTGCTCAAAAAATGTAAATCAAGAGGTAGTAAAAGAAAGTCAAGGAAAGAGGAAAAGGATGAAGGTGATGGTGATGATCTGGATGGGAGTGATTTGGTGAGGAAAGTCGATGTTAAGGCCAAGAAGAGAGTTCAATGTGGGGATGAAACACATGCGCTTAAAAAGTGTGAAACAAGCAAAAGGGAAAGAATGTCAAATGAGAAACCTAAAGGTCAGGGTGATGACTTGTGTGAAAGTGATAAAGAGAAAAAAGTGAGGAAAAGTTATAGGGGTAATGTCCCTAGGAGGAAGACGCAGATTGCGAAAGAGCATGATGAAACAGTAGAATCTACTCCAAGTGAGGATGAATTTACTATGGAAGATCTAATAAGCTTTGCTGAAGAGTATGTGAAGGCTGATAGAGAGAAAGAGCTTCAAAAATCTGAATCAGAAACTAAAGCTCTAGCTACAGAAACCTCTAACATTGGGTCAGAGAATGATATCACTGCCCATGTGAAAGATAAGGTAGCTACTGATGCAAAACTCTCCACCGCGTCCCTTCTGACAGAACCTTCCATTAGTGGAGCAAGCATCATTAATCATAGCAATACTCGTGATCCTGTTCGTGAAGTGCTTGAAATGTTCATGGGTCCCTTGTTGAAGAGTGCTGAAGAACTGGAAAGGAAGACTGATTCGAAGACAGAGAACATGATACTTGGCCGTGGAGTCAGGAAAAGAAGTCAGAATGATATAGCAGCAGAAGTGCCCCCTGTGAAAGAAAAAGAAAACCAGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53593.p1 GENE.R_Transcript_53593~~R_Transcript_53593.p1 ORF type:complete len:316 (+),score=97.04 R_Transcript_53593:311-1258(+)
MIGGARRQLPSWMVKSKAVDKASNSEAKEAKNKEIDSEKLDPKPCETQNLLSENESHLLKKCKSRGSKRKSRKEEKDEGDGDDLDGSDLVRKVDVKAKKRVQCGDETHALKKCETSKRERMSNEKPKGQGDDLCESDKEKKVRKSYRGNVPRRKTQIAKEHDETVESTPSEDEFTMEDLISFAEEYVKADREKELQKSESETKALATETSNIGSENDITAHVKDKVATDAKLSTASLLTEPSISGASIINHSNTRDPVREVLEMFMGPLLKSAEELERKTDSKTENMILGRGVRKRSQNDIAAEVPPVKEKENQS*

Click here to download the sequence:
Link to NCBI Protein BLAST