Transcript Information: R_Transcript_53638.p1


Annotated TAIR IDAT1G23980.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8484879-8485988 | Reverse length=369
E-Value4E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.890051584096
Replicate 27.810218029251
Replicate 37.9675609030095
Condition 2: 8 Hour
Replicate 17.3339305639092
Replicate 29.5600871639851
Replicate 39.7773168317543
Condition 3: 24 Hour
Replicate 19.7598407538066
Replicate 26.4993758083344
Replicate 39.56926219403


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53638.p1 GENE.R_Transcript_53638~~R_Transcript_53638.p1 ORF type:complete len:414 (+),score=65.11,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|1.7e-09,zf-rbx1|PF12678.3|1.8e-08,zf-C3HC4|PF00097.21|5e-06 R_Transcript_53638:611-1852(+)
ATGTCTAAATTAGACACCCAATTGAAGGAAAGTGGTGGTAGTAGTAGTAATATTTTGACACCTCCACCTCTTTTCTCCCCCTTACCTTCATTCCCATCTCATTCCAATTCTAGTAGTAGTAGTAGTAATAGTAGTAAAATTAGTCCAATTGTTCTTTTGGTTATAGTAATTCTAGCTGTAGTATTCTTTGTGTCAGGTATACTTCATCTCTTAGTTAGGTTCCTTATGAAAAGGCCCTCATTTTATTCCTCAGTTTCACATTCTAATAGACACCCAGAAAACCCAGGCTCTGATACTCTTCAAAGACAGCTTCAACAGCTCTTTAGGTTGCATGATTCAGGTCTAGACCAAGCTCTTATTGATGCTTTGCCTGTTTTTTATTACAAGGATATAATGGGTTTGAAGGAGCCCTTTGATTGTGCAGTTTGTCTTTGTGAATTCTCAGACCAAGATAAGCTCAGATTGCTTCCTGTGTGTAGTCATGCTTTCCACATTACTTGTATAGATACTTGGCTTTTGTCGAATTCGACCTGTCCCCTTTGTAGAGGGAGTTTATTGAGCTCAGATTTCGAGAACCAGGAGTTCAGCTTGGATTACTGGAGGGAATGGTCGTTCGGCTGTTCCATTGATCGCGATTATAATAGTAATAGTGGTAGTAACATTAATAGTAATGGTAACAATGTCTCGCAACGTTTTGTTGGTAATCATAATAAGCCTACAATCATGGAAGAGAACGCGAATGAGAGGAGGGTTTTCTCTGTAAGGCTAGGCAAGTTTCGGAGCTTGAATGATGGGAACGGAGAGACTCAGACGAATACTAAGGAAAGCGAAAGTAATAATGCTGAGACGAGTATTGGGACTAGTAGCACTAGTAGTCAAATAGATGCAAGAAGATGTTATTCACTAGGGTCATATCAGTATGTGCTTGCTGATTCAAATTTGCAAGTGGCATTGTCAAGTGAGGCAGGGGGTGCTAATGGTGGTACTACTAATAGTGTTGTAGAGATGGAGAAAATGATGGGACAAAGTGAAAATTGTTTAGTTGATGGAGATGTTGAAGGGAAGAAGATTAGTAGGAGAAATAGAGGGGACAGTTTCTCAGTATCCAAGATATGGCTTTGGTCCAAGAAGGGTAAATTCCCAGGTTCTTCAGATACCAATGTTGTTCATCATGTTCATGGTGGTCCTCGCTCTCTTAATGTTGTCTTGCCATTGTCTAGTAGGGATCAGGACCTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53638.p1 GENE.R_Transcript_53638~~R_Transcript_53638.p1 ORF type:complete len:414 (+),score=65.11,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|1.7e-09,zf-rbx1|PF12678.3|1.8e-08,zf-C3HC4|PF00097.21|5e-06 R_Transcript_53638:611-1852(+)
MSKLDTQLKESGGSSSNILTPPPLFSPLPSFPSHSNSSSSSSNSSKISPIVLLVIVILAVVFFVSGILHLLVRFLMKRPSFYSSVSHSNRHPENPGSDTLQRQLQQLFRLHDSGLDQALIDALPVFYYKDIMGLKEPFDCAVCLCEFSDQDKLRLLPVCSHAFHITCIDTWLLSNSTCPLCRGSLLSSDFENQEFSLDYWREWSFGCSIDRDYNSNSGSNINSNGNNVSQRFVGNHNKPTIMEENANERRVFSVRLGKFRSLNDGNGETQTNTKESESNNAETSIGTSSTSSQIDARRCYSLGSYQYVLADSNLQVALSSEAGGANGGTTNSVVEMEKMMGQSENCLVDGDVEGKKISRRNRGDSFSVSKIWLWSKKGKFPGSSDTNVVHHVHGGPRSLNVVLPLSSRDQDLA*

Click here to download the sequence:
Link to NCBI Protein BLAST