Transcript Information: R_Transcript_53670.p1


Annotated TAIR IDAT1G75380.1
Annotated Gene Namebifunctional nuclease in basal defense response 1
Annotated Gene Symbol(s)ATBBD1, BBD1
Annotation TypeHomolog
Chromosome Positionchr1:28281789-28283631 | Reverse length=325
E-Value8E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8852941322863
Replicate 25.1560535199517
Replicate 36.7850336677211
Condition 2: 8 Hour
Replicate 18.5545553486578
Replicate 29.4538411834886
Replicate 311.718128375187
Condition 3: 24 Hour
Replicate 19.2412439220378
Replicate 25.5836098457158
Replicate 39.4200248019558


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53670.p1 GENE.R_Transcript_53670~~R_Transcript_53670.p1 ORF type:5prime_partial len:395 (+),score=74.25,DNase-RNase|PF02577.10|5.8e-21 R_Transcript_53670:1-1185(+)
CCTTTGTTTAATTCTCCTGAAAGACTCCTCTGCTTTCTTCTGACACCTTCTTCGGTTTCCCTCACTTACAAGTTTCCTCTCTCCCCTTTCTCACAATCTATCTATCTATCTATCTTTCTCCTCCTCATCTCCACAATTCCTCCTAATTCATCCTCTAATCAATTCAGTTTCCACCGCACCGATTCATCTGTCTCGAACAAAAAAATGGCGGCACTACAAGCAGCTGTAGCTAATAGAATCGGCGGTGATAGACTGTTGAGCGCTTTAGTCACCAAACAAGTTTATCTCAATGCGATGTTCGTTAACGGTCAAATTTCGGCGGTCAAAAAAAGCAATAAATGTCGCGGTGGCGGTGGTGTTAGGGTTCGGAGTTGCCCTCGTACTGGAACTTGTAGGAAAATTCGGTGTCACTTGAGCTCCCCAAATGACGGTGATAGCGCTACCGGAAATTCTCACGGCGGTGATGCTGATTTTGTCAATTCCACTGTCATCGAGGCTGTTGAGGTGAAAAATGGATCAGATGGCTTCATGATAAAAATGAGAGATGGAAGATACCTTAGATGTGTGTATAACCATCCCAAAGGGGGTTATCCACCAGATTATATTTCGCACCCTGCTATGGTTCTGAAGATGGAAGATGGAAGCGGTCTTCTGTTCCCAATCATTGTTTTGGAGATGCCTAGTGCTTTGTTGATGGCTGCATTGCGCAATGTTGAAATGGCTAGGCCAACCATATATCAGATAGTGTCAGAAATGATTGAAACAATGGGGTACATGGTGAAATATGTTAGAGTTACAAAGAGGGTGCAAGAGGCTTACTTCGCTGAGCTGTGTGTTGTAAAAGTGAATGATGAAACAGAGTGTCATAGTTTTGATCTTCGGCCTTCTGATGCCATCAACATTGCTGTAAGATGTAAGGCCCCTATCCAAGTCAACAAGTTTTTGGCGCAGAATGATGGATTGAGAATTGTTGAATCTGCAGTTTCTCCTTTCAAACCTCCACTCCCTGATGGCTCTTTGTTGTCAGAAATGGATAGACCTGATGGGCAGCCCTGTCCTGAAAGTGAAGAGTTTGTCCTTCTACGGAACATGTTAATCGCTGCTGTTGAGGAGCGTTATCATGATGCAGCCCAATGGAAGGATTTGCTTAAGCAGTTCAGGTCAAGAAAACAGAAGTGGACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53670.p1 GENE.R_Transcript_53670~~R_Transcript_53670.p1 ORF type:5prime_partial len:395 (+),score=74.25,DNase-RNase|PF02577.10|5.8e-21 R_Transcript_53670:1-1185(+)
PLFNSPERLLCFLLTPSSVSLTYKFPLSPFSQSIYLSIFLLLISTIPPNSSSNQFSFHRTDSSVSNKKMAALQAAVANRIGGDRLLSALVTKQVYLNAMFVNGQISAVKKSNKCRGGGGVRVRSCPRTGTCRKIRCHLSSPNDGDSATGNSHGGDADFVNSTVIEAVEVKNGSDGFMIKMRDGRYLRCVYNHPKGGYPPDYISHPAMVLKMEDGSGLLFPIIVLEMPSALLMAALRNVEMARPTIYQIVSEMIETMGYMVKYVRVTKRVQEAYFAELCVVKVNDETECHSFDLRPSDAINIAVRCKAPIQVNKFLAQNDGLRIVESAVSPFKPPLPDGSLLSEMDRPDGQPCPESEEFVLLRNMLIAAVEERYHDAAQWKDLLKQFRSRKQKWT*

Click here to download the sequence:
Link to NCBI Protein BLAST