Transcript Information: R_Transcript_53671.p1


Annotated TAIR IDAT1G75380.1
Annotated Gene Namebifunctional nuclease in basal defense response 1
Annotated Gene Symbol(s)ATBBD1, BBD1
Annotation TypeOrtholog
Chromosome Positionchr1:28281789-28283631 | Reverse length=325
E-Value2.3E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9526848603222
Replicate 20.55578442278436
Replicate 30.94321860690039
Condition 2: 8 Hour
Replicate 10
Replicate 21.315345990658
Replicate 34.7514510153366
Condition 3: 24 Hour
Replicate 11.4179822111229
Replicate 20.38921045101019
Replicate 31.351887642426


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53671.p1 GENE.R_Transcript_53671~~R_Transcript_53671.p1 ORF type:5prime_partial len:340 (+),score=49.00,DNase-RNase|PF02577.10|8.8e-18 R_Transcript_53671:1-1020(+)
CCTTTGTTTAATTCTCCTGAAAGACTCCTCTGCTTTCTTCTGACACCTTCTTCGGTTTCCCTCACTTACAAGTTTCCTCTCTCCCCTTTCTCACAATCTATCTATCTATCTATCTTTCTCCTCCTCATCTCCACAATTCCTCCTAATTCATCCTCTAATCAATTCAGTTTCCACCGCACCGATTCATCTGTCTCGAACAAAAAAATGGCGGCACTACAAGCAGCTGTAGCTAATAGAATCGGCGGTGATAGACTGTTGAGCGCTTTAGTCACCAAACAAGTTTATCTCAATGCGATGTTCGTTAACGGTCAAATTTCGGCGGTCAAAAAAAGCAATAAATGTCGCGGTGGCGGTGGTGTTAGGGTTCGGAGTTGCCCTCGTACTGGAACTTGTAGGAAAATTCGGTGTCACTTGAGCTCCCCAAATGACGGTGATAGCGCTACCGGAAATTCTCACGGCGGTGATGCTGATTTTGTCAATTCCACTGTCATCGAGGCTGTTGAGGTGAAAAATGGATCAGATGGCTTCATGATAAAAATGAGAGATGGAAGATACCTTAGATGTGTGTATAACCATCCCAAAGGGGGTTATCCACCAGATTATATTTCGCACCCTGCTATGGTTCTGAAGATGGAAGATGGAAGCGGTCTTCTGTTCCCAATCATTGTTTTGGAGATGCCTAGTGCTTTGTTGATGGCTGCATTGCGCAATGTTGAAATGGCTAGGCCAACCATATATCAGATAGTGTCAGAAATGATTGAAACAATGGGGTACATGGTGAAATATGTTAGAGTTACAAAGAGGGTGCAAGAGGCTTACTTCGCTGAGCTGTGTGTTGTAAAAGTGAATGATGAAACAGAGTGTCATAGTTTTGATCTTCGGCCTTCTGATGCCATCAACATTGCTGTAAGATGTAAGGTATACACTGGTGCACTGATTAGCAACTTAAAAATGGTTTATATGGATTGTGTGCCGATTGAGTCCATCATGGTGCTAACAATCGCTGATCAGTACACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53671.p1 GENE.R_Transcript_53671~~R_Transcript_53671.p1 ORF type:5prime_partial len:340 (+),score=49.00,DNase-RNase|PF02577.10|8.8e-18 R_Transcript_53671:1-1020(+)
PLFNSPERLLCFLLTPSSVSLTYKFPLSPFSQSIYLSIFLLLISTIPPNSSSNQFSFHRTDSSVSNKKMAALQAAVANRIGGDRLLSALVTKQVYLNAMFVNGQISAVKKSNKCRGGGGVRVRSCPRTGTCRKIRCHLSSPNDGDSATGNSHGGDADFVNSTVIEAVEVKNGSDGFMIKMRDGRYLRCVYNHPKGGYPPDYISHPAMVLKMEDGSGLLFPIIVLEMPSALLMAALRNVEMARPTIYQIVSEMIETMGYMVKYVRVTKRVQEAYFAELCVVKVNDETECHSFDLRPSDAINIAVRCKVYTGALISNLKMVYMDCVPIESIMVLTIADQYT*

Click here to download the sequence:
Link to NCBI Protein BLAST