Transcript Information: R_Transcript_53695.p1


Annotated TAIR IDAT3G12320.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06980.4); Has 102 Blast hits to 102 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3924034-3925262 | Forward length=269
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.791058677633
Replicate 29.6398108829545
Replicate 38.4999843910251
Condition 2: 8 Hour
Replicate 11.5399915061161
Replicate 20.98444133892012
Replicate 31.9407382424313
Condition 3: 24 Hour
Replicate 17.7969911339372
Replicate 27.4904652835923
Replicate 35.5063408017352


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53695.p1 GENE.R_Transcript_53695~~R_Transcript_53695.p1 ORF type:3prime_partial len:159 (+),score=30.96 R_Transcript_53695:1420-1893(+)
ATGCTAGTTGATGATGACTCAACAAGCAGGATGTTGGGTTTTAAGAGCTTTCCCTGTGATACAGATGTAGGGGGAAGCTCAGACAATGGACATTCCAGTGTACCTAATCTAAGTTACGGAAACAGCTCCAACCAAAGTAATTGTGGACCAGGAGAGGCATTGGGAATGATGGGCATGTTTCTCGCTGATCAAGAGCCTGGGCAAGAGGATTCCTTTGCAGAAGAATCCGTGTTGCTGGGACTTGAGGCTGTCCTGAGCCAGATGAGCAACAAAACTCGACTATGCTTTCGAGATTCCTTGTACCGCCTTGCTCAACACTCACAGCCAGAGATATCAACAGAAGTTCTAGCGGAAGACCGTCCATTGGACAAGCAAAACAGTGATGTGAAAACAAGATCAACAAGAACAGTGACAGCAGAATCACAAACCAATACCATTGACAGAGCTGTGGCTAATCTTATGTTCCATATGGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53695.p1 GENE.R_Transcript_53695~~R_Transcript_53695.p1 ORF type:3prime_partial len:159 (+),score=30.96 R_Transcript_53695:1420-1893(+)
MLVDDDSTSRMLGFKSFPCDTDVGGSSDNGHSSVPNLSYGNSSNQSNCGPGEALGMMGMFLADQEPGQEDSFAEESVLLGLEAVLSQMSNKTRLCFRDSLYRLAQHSQPEISTEVLAEDRPLDKQNSDVKTRSTRTVTAESQTNTIDRAVANLMFHMV

Click here to download the sequence:
Link to NCBI Protein BLAST