Transcript Information: R_Transcript_53696.p1


Annotated TAIR IDAT5G06980.4
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12320.1).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2167799-2169110 | Forward length=279
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2935657744149
Replicate 21.5389958420323
Replicate 31.4391667599677
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.095034610577942
Condition 3: 24 Hour
Replicate 10.72118766160327
Replicate 20.11547255963653
Replicate 31.6043343749558


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53696.p1 GENE.R_Transcript_53696~~R_Transcript_53696.p1 ORF type:complete len:191 (+),score=36.74 R_Transcript_53696:1420-1992(+)
ATGCTAGTTGATGATGACTCAACAAGCAGGATGTTGGGTTTTAAGAGCTTTCCCTGTGATACAGATGTAGGGGGAAGCTCAGACAATGGACATTCCACTGTACCTAATCTAAGTTATGGAAACAGCTCCGACCAAAGTAATTGTGAACCAGGAGAGGCATTGGGAATGATGGGCATGTTTCTCGCTGATCAAGAGCCTGGGCAAGAGGATTCCTTTGCAGAAGAATCCGTGTTGCTGGGACTTGAGGCTGTCCTGAGCCAGATGAGCAACAAAACTCGACTATGCTTTCGAGATTCCTTGTACCGCCTTGCTCAACACTCACAGCCAGAGATATCAACAGAAGTTCTAGCGGAAGACCGTCCATTGGACAAGCAAAACAGTGATGTGAAAACAAGGCAGCAGTTAATGCATTTCAACGAAGGGTTGAAGGGAAACAGCCTTTCTGCAATTGCAGACGCAAGGCTGCGTACATCTGACCCCCTTTATCTCACCCTAGGCAGGAGCCTCAAGAGGGGTGTTGAGATAAAGATCAACAAGAACAGTGACAGCAGAATCACAAACCAATACCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53696.p1 GENE.R_Transcript_53696~~R_Transcript_53696.p1 ORF type:complete len:191 (+),score=36.74 R_Transcript_53696:1420-1992(+)
MLVDDDSTSRMLGFKSFPCDTDVGGSSDNGHSTVPNLSYGNSSDQSNCEPGEALGMMGMFLADQEPGQEDSFAEESVLLGLEAVLSQMSNKTRLCFRDSLYRLAQHSQPEISTEVLAEDRPLDKQNSDVKTRQQLMHFNEGLKGNSLSAIADARLRTSDPLYLTLGRSLKRGVEIKINKNSDSRITNQYH*

Click here to download the sequence:
Link to NCBI Protein BLAST