Transcript Information: R_Transcript_53746.p1


Annotated TAIR IDAT1G19180.1
Annotated Gene Namejasmonate-zim-domain protein 1
Annotated Gene Symbol(s)JAZ1, TIFY10A
Annotation TypeHomolog
Chromosome Positionchr1:6622312-6623271 | Forward length=253
E-Value7E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.699173931292
Replicate 233.875072047113
Replicate 321.373944745852
Condition 2: 8 Hour
Replicate 120.844844137246
Replicate 222.444007795985
Replicate 322.402731323303
Condition 3: 24 Hour
Replicate 131.06558301444
Replicate 227.302606730715
Replicate 332.628139700542


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53746.p1 GENE.R_Transcript_53746~~R_Transcript_53746.p1 ORF type:complete len:269 (+),score=56.99,tify|PF06200.10|6.3e-18,CCT_2|PF09425.6|4.4e-12 R_Transcript_53746:283-1089(+)
ATGTCAACCACATCGGCAGTTGGTGATTCCGGCAAGATTTCCGGTCAAAAGATGACCTTTTCTCAGACTTGCAATTTGCTTAGCCAATATGTCAAGGAAAAACAACGCAATCTTTCCATCACCCCCAATAACCGTGGGCCTGAAAGTTTCAACAACAACAACCACCACCACGAAAACAGGGCAACAATGAATTTGTTTCCAGTGAAAGAAGTTGCTGAAGATTCCAATGGTTGTATTGGGAGTACTATTAATCTGTTTTCTCAGCTTTCTGGGTTTAGTCCTTTGATGGCTAATGCCAGTGGAAGCAATAAGCGTGTGAGCACTGAACCTCCAGCGGCTCAAATGACCATATTCTATGGAGGGCAAGTCCTTGTTTTCAACGACTTGCCGGCTGATAAGGCTAAGGAAGTGATGGATCTGGCTAGCAGCTACGAACCGAGCCAGAAGAAGCGGAAGGTGGAAACCCCCACCACCAATTTGGCGGTTCCTAGCTCAGTGCCTATGCCAAACACGAGCTCCATCCGGTGTCCTAATCCGACCCAGATTGTTAATGGTGTTCCTAATTGCGGTCAGAAGGTGATCCCAGCCACTGTGGCTCTACCAGCGGCGGCTACTGCAACTGATCTGCCTCAAACTAGGAAGGCTTCTCTTCACCGTTTCCTGGAGAAAAGAAAAGACAGGCTCGTGGGAAAAGCCCCTCAAGGCGCCGATGTCAATGGTGGAGCTCCAACAAAGCCTGTTGATGAAAAGTCCTGGTTAGGGTTAGGTTCTCTGCCACTATTCCAGGCTCAGCAACAGCAGCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53746.p1 GENE.R_Transcript_53746~~R_Transcript_53746.p1 ORF type:complete len:269 (+),score=56.99,tify|PF06200.10|6.3e-18,CCT_2|PF09425.6|4.4e-12 R_Transcript_53746:283-1089(+)
MSTTSAVGDSGKISGQKMTFSQTCNLLSQYVKEKQRNLSITPNNRGPESFNNNNHHHENRATMNLFPVKEVAEDSNGCIGSTINLFSQLSGFSPLMANASGSNKRVSTEPPAAQMTIFYGGQVLVFNDLPADKAKEVMDLASSYEPSQKKRKVETPTTNLAVPSSVPMPNTSSIRCPNPTQIVNGVPNCGQKVIPATVALPAAATATDLPQTRKASLHRFLEKRKDRLVGKAPQGADVNGGAPTKPVDEKSWLGLGSLPLFQAQQQQL*

Click here to download the sequence:
Link to NCBI Protein BLAST