Transcript Information: R_Transcript_53752.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2284985248329
Replicate 28.0601911550718
Replicate 37.4908288821541
Condition 2: 8 Hour
Replicate 16.3825714317464
Replicate 210.491598588992
Replicate 37.3122602025256
Condition 3: 24 Hour
Replicate 16.4194816418699
Replicate 26.0625830125758
Replicate 35.4978594711164


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53752.p1 GENE.R_Transcript_53752~~R_Transcript_53752.p1 ORF type:complete len:211 (+),score=44.48 R_Transcript_53752:489-1121(+)
ATGCAGACAGATCCTAATATTTTAGCATTTCGCGATGGTGGGATTAAAAATTTGAAGGAGCTTGAAGTGATGTATTCGAAGATCATAGCTAGTAGTGAGCTAGCTTGGAACCAATATGATGATGAAGGCGAGAGTGAACCCTTAGAAGACATAGAATCTACTTTGGGAAATGAGCAGCTTGAAAATGAAGAAGAGGAAGAAGAAATCGAGAAAATGAACCATGATTCCAACTTTGAAGTACAAGAGAAGGAAGTTAGAAATGACGATAATAGAAAGAAAGCACCGGTTTCTTCAAGTGGAGCTAAAGGAAAAATTAAAAAAACTGGAAAGAAGTCTAAAATTGCTACTGCACCACTTATGCAAGCTGAATTGAATCGCATAGCTTCATCAATAGAGACTTACTCTCAATATAGTACTAGAATGATGGCAAGTAGGGTGGATCCTCCTGAATCTAGTATAGCAGAATGCTTAAAGTTGCTAGGCTCCATCCCGGAAGCAAAGATCGGTAGTGAGTTATATATGCTAGGTACTCGACTATTTTTGAAAAGAGAGTATAGGTTGATGTTTGTTAACTTGCCTAGTGAAGTTAGAGTGGCATGGCTTGAGCAAGAGCTTAACAGAGAGAAAATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53752.p1 GENE.R_Transcript_53752~~R_Transcript_53752.p1 ORF type:complete len:211 (+),score=44.48 R_Transcript_53752:489-1121(+)
MQTDPNILAFRDGGIKNLKELEVMYSKIIASSELAWNQYDDEGESEPLEDIESTLGNEQLENEEEEEEIEKMNHDSNFEVQEKEVRNDDNRKKAPVSSSGAKGKIKKTGKKSKIATAPLMQAELNRIASSIETYSQYSTRMMASRVDPPESSIAECLKLLGSIPEAKIGSELYMLGTRLFLKREYRLMFVNLPSEVRVAWLEQELNREKI*

Click here to download the sequence:
Link to NCBI Protein BLAST