Transcript Information: R_Transcript_53753.p3


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.53815087796143
Replicate 20
Replicate 30.59840474572704
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53753.p3 GENE.R_Transcript_53753~~R_Transcript_53753.p3 ORF type:5prime_partial len:91 (+),score=13.80,Myb_DNA-bind_3|PF12776.3|1.5e-10 R_Transcript_53753:2-274(+)
AGATCTCTTGCTGCTGGTAATCCTAATATTCAAGCTCCTCGTCCTTCAAAACAATCTCAATCATCACAAAGCTGTTCTCAGATGTCTAAATTGGTAGTGAAGAAAGAGAAGGCCTGTTGGGATGATTTTACTACTAGGATTTTTTGTCAAGTGTGTGCCGAGCAAGTCCATTTGGGGAATAGACCTCATACACATTTTAACAAGGAAGGATGGAAGAATGTGATTAATAACTTTGCACTAAGGACAAACAGAAGTATTCATATTTGCAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53753.p3 GENE.R_Transcript_53753~~R_Transcript_53753.p3 ORF type:5prime_partial len:91 (+),score=13.80,Myb_DNA-bind_3|PF12776.3|1.5e-10 R_Transcript_53753:2-274(+)
RSLAAGNPNIQAPRPSKQSQSSQSCSQMSKLVVKKEKACWDDFTTRIFCQVCAEQVHLGNRPHTHFNKEGWKNVINNFALRTNRSIHICS*

Click here to download the sequence:
Link to NCBI Protein BLAST