Transcript Information: R_Transcript_53776.p1


Annotated TAIR IDAT4G02030.2
Annotated Gene NameVps51/Vps67 family (components of vesicular transport) protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:892262-897175 | Forward length=805
E-Value6E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.08482061037564
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53776.p1 GENE.R_Transcript_53776~~R_Transcript_53776.p1 ORF type:3prime_partial len:428 (+),score=105.35,Vps51|PF08700.7|3.4e-22,Vps51|PF08700.7|6.8e+03,Dor1|PF04124.8|2.2e-05,Dor1|PF04124.8|27,Dor1|PF04124.8|1.2e+03,COG2|PF06148.7|1.9e-06,COG2|PF06148.7|7.2e+03,COG2|PF06148.7|1.2e+03 R_Transcript_53776:139-1281(+)
ATGGCAGCTGAAATAAAATATCTCGACACTGATCTGCAAATGCTAGTGTATGAGAACTACAATAAGTTTATCAGTGCCACAGAAACGATTAAGAGGATGAATAACAATATTGTGGGCATGGAAGCAAATATGGAACAACTACTTGAGAAGTTTATATATGATTTACCTGAAAGACTTGGAAAGTGCATAAAATCAGAAGCTTGTGCTGATGCAGTCAAGTTTTACACTGGAGCCATGCCCATTTTCAAGGCATATGGAGATTCATCATTCAAGGATTGTAAGAAAGCTTCTGAAGAGGCAATGACCACCATAATTAAGAATCTGCAGGGAAAACTTTTTTCAGATTCAGAATCCATTCAAACTAGAGCTGAGGCTGTAATGCTTCTCAAACAGCTGGACTTTCCGGTTGACAGTCTGAAAGAACAGCTCTTTGAAAAGCTGGAGCAATCTCTTGGCAACCTACAGCTGCAATTCAATGAAGGAAGTGCTTATTCAGGAAAATCAGATGAATCTGCGGCTCCACTGGGATCAACTGATCATATACCCGCTGCTCGTGAGGTTTCAACTCGTGAGTTGGTAGAGGCTGTCCGTGCTTACCGTGTTATATTTCCTGATTCAGAACAGCAACTAATTAAGATCTCACATGATCTTGTTACCAAGCAATTTGAAATAATTGAGAAGCGGATAAAGAAGCAAATTTCTTCAGCTGATTTGTTGCGAACACTAGGACTTATTTGGGATGATGTACTTCTAATGGATGAAGTATTGCCAGAAGCTTCTGTTGCCGATGTTTGTTTGGAGGCTGCCAATCGTGCTGTGAAGCAGTACATTTGTAGCTCCTTTTCTCATCTGTTGCAAGATATCTCTGATTCCCTTATGAAAGTTCAATTAAGAGAAAGGGAGGCAGTGAAAGAAGAGCATTCTCTGCAGGTTGTTCTGGAGGCCAGCAAGAAATCAGTGATTCAAGGAAGTATGGGTGTCTTGCTGGACTTTCGTCAACTCCTAGATGACAGCCTGCCGTTAGTGCTTCGATTGAGAGATTTTGTTGTCGACTGGGTGCAAGAAGGGTTTCAAGACTTCTTCAGAAGACTTTATGAGCGCTTTCTATTGCTTGCGGGAAAAAGTAATTCCTCTGGTCAAGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53776.p1 GENE.R_Transcript_53776~~R_Transcript_53776.p1 ORF type:3prime_partial len:428 (+),score=105.35,Vps51|PF08700.7|3.4e-22,Vps51|PF08700.7|6.8e+03,Dor1|PF04124.8|2.2e-05,Dor1|PF04124.8|27,Dor1|PF04124.8|1.2e+03,COG2|PF06148.7|1.9e-06,COG2|PF06148.7|7.2e+03,COG2|PF06148.7|1.2e+03 R_Transcript_53776:139-1281(+)
MAAEIKYLDTDLQMLVYENYNKFISATETIKRMNNNIVGMEANMEQLLEKFIYDLPERLGKCIKSEACADAVKFYTGAMPIFKAYGDSSFKDCKKASEEAMTTIIKNLQGKLFSDSESIQTRAEAVMLLKQLDFPVDSLKEQLFEKLEQSLGNLQLQFNEGSAYSGKSDESAAPLGSTDHIPAAREVSTRELVEAVRAYRVIFPDSEQQLIKISHDLVTKQFEIIEKRIKKQISSADLLRTLGLIWDDVLLMDEVLPEASVADVCLEAANRAVKQYICSSFSHLLQDISDSLMKVQLREREAVKEEHSLQVVLEASKKSVIQGSMGVLLDFRQLLDDSLPLVLRLRDFVVDWVQEGFQDFFRRLYERFLLLAGKSNSSGQE

Click here to download the sequence:
Link to NCBI Protein BLAST