Transcript Information: R_Transcript_53796.p1


Annotated TAIR IDAT2G20562.1
Annotated Gene Nameunknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31090.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8850367-8850835 | Reverse length=73
E-Value1.3E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0932940082243
Replicate 27.7250539267512
Replicate 311.669470096153
Condition 2: 8 Hour
Replicate 16.4679643256874
Replicate 28.8599720502811
Replicate 38.9045637005672
Condition 3: 24 Hour
Replicate 16.7140756986682
Replicate 28.3227392039914
Replicate 39.2919501029281


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53796.p1 GENE.R_Transcript_53796~~R_Transcript_53796.p1 ORF type:complete len:106 (+),score=17.31 R_Transcript_53796:288-605(+)
ATGAAAGACATCAAGATGGCCCAAGAAGCAAATCAACAACATCATCAGCAACAACATCAACAACAACATAAACAAGAACAAGAACAAAAGAGAAGAGGTTGCGGTTGTCGGCCATTGGCATTCTTGCTTGGACTTCCTTTTGCTCTTTGTGCTGTTCATCTCTCCCTTGCTGCTGCCATTGTTTGGATTCTCGGGTCTATGCTGAGTTACGTGTGCCCATGTCTAAAATGCTGTGCAGACCTTGCAAATACGGCCATGGATCTCATAAAATCTCCTATAAATATCTGTAGATGGTTTGTTGATAAGATCCCTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53796.p1 GENE.R_Transcript_53796~~R_Transcript_53796.p1 ORF type:complete len:106 (+),score=17.31 R_Transcript_53796:288-605(+)
MKDIKMAQEANQQHHQQQHQQQHKQEQEQKRRGCGCRPLAFLLGLPFALCAVHLSLAAAIVWILGSMLSYVCPCLKCCADLANTAMDLIKSPINICRWFVDKIPC*

Click here to download the sequence:
Link to NCBI Protein BLAST