Transcript Information: R_Transcript_53822.p1


Annotated TAIR IDAT1G21830.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7661429-7662521 | Reverse length=206
E-Value5.5E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0549503808273
Replicate 26.2903895984051
Replicate 37.1409667809868
Condition 2: 8 Hour
Replicate 17.3358461785269
Replicate 26.9708012217461
Replicate 39.0390611591401
Condition 3: 24 Hour
Replicate 19.1087656207085
Replicate 25.8040154975203
Replicate 37.8866628224043


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53822.p1 GENE.R_Transcript_53822~~R_Transcript_53822.p1 ORF type:complete len:247 (+),score=36.92,DUF740|PF05340.8|8.6e-07,DUF740|PF05340.8|2.1e+03 R_Transcript_53822:113-853(+)
ATGAATGAAGTTGATAAAGGAGGGTGTTATTTCCACCCAAAGGAAGTTGTTACTGGGGTTTGTCATATTTGCTTGAATGAAAGGCTCCTCATATTAGCTGCCAAACAAGGCCTTAATAAAGCTTCAAAATCCTCCAAATATTATAATTCTAATTCCAGTAGCCAAAGGACTCGTTCTTATTCCAATCTCTATAAATCCAAGCCCTCCATTTCTCTTCCTAGTAAGATCTTCGCCCTTGGATCCTTCTTTAACCGAAGATATCATCTTGGCCCACGTCACAGGAAACCTGATCCTTGTGATCTCATTGATTTTGTCGATAATCCTAGCTCTGCTTCTACCAGCTTAGAAGATGAATCATTTATATCAATAAAGTTTGGGGACAATGGAGTAGCATCATGGGACAAGAGTAGCAGCAATACAGTAGTTTCAAAGGTGAGACTGGAAAATTGCAGCATGACATGGGGCGGTCAAACCTTGGTCAAACACAGCTGCAGTGGCAGTTCTGATAATAATAATAACAATAGCAGTAAAAGTGTGGTGGGCCATGCTAAGCCTATGGCGCCGCTGAGGTGGCGCAACCGGATTGGCCAAATCTTACAGGTCATCAGATGGAACAAGTCTACAGCTGGATCAGGGAGCAGTAAGAATAATAATAAGAGTAATGATGCAGTTAATAAGGTTGTGAGGAGTAATAACAAAGGTTTGATAAGGCCTCCAAAAATAATTAGGACCAAAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53822.p1 GENE.R_Transcript_53822~~R_Transcript_53822.p1 ORF type:complete len:247 (+),score=36.92,DUF740|PF05340.8|8.6e-07,DUF740|PF05340.8|2.1e+03 R_Transcript_53822:113-853(+)
MNEVDKGGCYFHPKEVVTGVCHICLNERLLILAAKQGLNKASKSSKYYNSNSSSQRTRSYSNLYKSKPSISLPSKIFALGSFFNRRYHLGPRHRKPDPCDLIDFVDNPSSASTSLEDESFISIKFGDNGVASWDKSSSNTVVSKVRLENCSMTWGGQTLVKHSCSGSSDNNNNNSSKSVVGHAKPMAPLRWRNRIGQILQVIRWNKSTAGSGSSKNNNKSNDAVNKVVRSNNKGLIRPPKIIRTKE*

Click here to download the sequence:
Link to NCBI Protein BLAST