Transcript Information: R_Transcript_53824.p1


Annotated TAIR IDAT1G21830.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7661429-7662521 | Reverse length=206
E-Value9E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3075985754856
Replicate 26.5520370093412
Replicate 34.3863965609654
Condition 2: 8 Hour
Replicate 15.0360998827667
Replicate 25.5505735066773
Replicate 36.1792717005573
Condition 3: 24 Hour
Replicate 17.6526024092347
Replicate 26.1003907569682
Replicate 34.9674223402888


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53824.p1 GENE.R_Transcript_53824~~R_Transcript_53824.p1 ORF type:complete len:141 (+),score=22.36 R_Transcript_53824:637-1059(+)
ATGTTTATTTTTGGGGGATATGAAGATGAATCATTTATATCAATAAAGTTTGGGGACAATGGAGTAGCATCATGGGACAAGAGTAGCAGCAATACAGTAGTTTCAAAGGTGAGACTGGAAAATTGCAGCATGACATGGGGCGGTCAAACCTTGGTCAAACACAGAGGTCCTGCCTGCAGTGGCAGTTCTGATAATAATAACAATAGCAGTAGAAGTGTGGTGGGCCATGCCAAGCCTAGGGCCCCGCTGAGGTGGCGCAACCGGATTGGCCAAATCTTACAGGTCATCAGATGGAACAAGTCTACAGCTGGATCAGGGAGCAGTAAGAATAATAATAAGAGTAATGATGCAGTTAATAAGGTTGTGAGGAGTAATAACAAAGGTTTGATAAGGCCTCCAAAAATAATTAGGACCAAAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53824.p1 GENE.R_Transcript_53824~~R_Transcript_53824.p1 ORF type:complete len:141 (+),score=22.36 R_Transcript_53824:637-1059(+)
MFIFGGYEDESFISIKFGDNGVASWDKSSSNTVVSKVRLENCSMTWGGQTLVKHRGPACSGSSDNNNNSSRSVVGHAKPRAPLRWRNRIGQILQVIRWNKSTAGSGSSKNNNKSNDAVNKVVRSNNKGLIRPPKIIRTKE*

Click here to download the sequence:
Link to NCBI Protein BLAST