Transcript Information: R_Transcript_53838.p1


Annotated TAIR IDAT1G06590.1
Annotated Gene Nameunknown protein; Has 380 Blast hits to 268 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 73; Plants - 49; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2016504-2024505 | Reverse length=916
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3287511283928
Replicate 23.4536398288246
Replicate 35.2151504984704
Condition 2: 8 Hour
Replicate 14.0276313802114
Replicate 23.6780971220251
Replicate 36.4657697961509
Condition 3: 24 Hour
Replicate 17.2774748401546
Replicate 25.9582834475634
Replicate 38.2257713692588


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53838.p1 GENE.R_Transcript_53838~~R_Transcript_53838.p1 ORF type:complete len:918 (+),score=183.56,ANAPC5|PF12862.3|4e-22,ANAPC5|PF12862.3|2.6e+03 R_Transcript_53838:377-3130(+)
ATGGCGGGCATGTTGAAGCCTCCAAGAAGCACATTCTCAATAACGCCACATAAGGTGTCAATGTGTATTCTCATTCAAATATACGCTTATCCTGGACCTTTCTTTTATCCCGATCTTTTCTCTTCTGTTTCCCACCACAATTCCTTTGGTTTGTTCTTATTGTCCTCCATTAAGTCTTATGATGATATTTTGGAGCTGAAGCTGGATGAACTTATCTCTCAACTAAGAGAAATTGGGGGCTTACTTGACCGGAGATTAACTCACAGATTGTCGTCATTATCATCGCCTGATGAGTTGTTTAATCTTTTCAGTGAATTGCAGGGCATCCTGGGCCCCCCTGACTCAAGTGTCCTGGAAGATGATCAGATTAGTCTAGATCCTAGTAGCAACCTTGGAATTTTTATGCGTCGATGCCTACTTGCCTTCAGCATGTTATCATTCGAGGGAGTATGCCATCTGCTATCAAACATTGAGTCATATTGTAAAGAATTGCTTTCTGGTTCTACATCAGATGATCTGACTCATCTGGAAGGTTCTAATGATGAATCTGAGAGATTAGTAGAATATGAAAACATGGATTTGGATAATTTTGTTTCTAAAGAAGTTACCGAAGTAGCAGAAACAAGAAAAGGAGCTAGTAAAGCTATCTCATTTCATCTTCATGTGCCAAAAGTCCTCAATGAGCTTGTTCAAGGTGTTGAGGTTTCAGTGGATGCGAGGCATTCTGCTAAAGCTAGAGAACTTCGCTCATCTAAGCTTCCTGCTATGGTTGATTTGGATATGTTTGATGCTAACACTGATATATTCTTGCGTACAAACTTGCAAATGCATGGGTACTTGCTGGAACAAGCTGATGATATTGAAAAGCATGGTAGTTCGTTTCCCTTAAACACTATTGAATCTATTCTAAAGCAACTTCAGAAATTGGCACCAGAATTACACCGTGTCCATTTTCTGCGCTACTTAAATATGCTGCACCATGATGATTATACTGGTGCTTTGGAGAATCTCCATCGTTATTTTGATCATAGTGCAGGGATGGAGGGTTTTGATCTTTGTTCATCTTCCTCTGATGAAAATAGCTTTGGGAAGTATGAAATTGCTTTGTTATGCTGCGGAATGATGCATGTTCATTTTGGTCATCCTAAGTTGGCTTTAGAGGTTTTAACGGAAGCAGTCCGTGCTTCTCAACAGCTCAGTAATGACTCATGTCTTGCGTACACGTTGACTGTTATTTGCAAATTGTTGTCTCAATTTGGTATAGCAACCACCACAAGAATACTTGGATCATCATACTCCCCTATGACCAGTATAGGCTCTACATCAACCATCCATCAGCAGTTGTATGTGCTCTTACGCAGAGCTCTTACTCGATCGGAGTCTCTAAAGCTGACACCATCGGTGTCTGCTAACCATCTTGAGATGGCTAAATTTGACATGATGCATGTCCAAAGACCTATGCTATCTTTTGGTCCCAAAGCTTCTGTTAGCCTTAGAACACGTCCCGCTGATGTTTCCAAGGATCTAAGACTAAGCTCTCATGTTATCAGTGAATTCAGCAGTGAAGGTTTAACAGTATCTCGTGAAGGTGTTTTTGCTACTCAATGGCTTAAGAATCCACAAAAGCCAATGGGCCCTTTAATGGTAGATCCAGAAGATGTATCAGGAAATAATTGTAGCACTTTTGATTTTTGTGCGCAAGAAAGTTCAATCCCTAGGTCTGTGCTGCAATTATTTGGTTCTTCATTCTTGAATCGTGCCACAGCTTGGGAGATGTATGGAAGCACCTCGCTTGCCAGGATGAATGCACTTGTGTATGCCACTTGCTTTGCTGATGCTTCAAGCTTGGAGAATCTTGCCTTGGCCTGTGTGAAGCTTGTCCAAAATGTTGCAGCCTACAAGGGCTACAGGGAGGCATTTGTTGCATTTAGGATTGTAGAGGAGAAGTTTCATGTCATCTCAAAATCACAAATCTCATTGCTGAAACTTCAACTGCTCCATGAGCATGCCTTACATAGAGGACATTTGAAGCTTGCTCAACAAGCATGTGATGAGCTTAGTGCATTGGCCTCCTCTGTGACTGGTGTTGATGTTGATCTAAAGACTGAAGCAAGCCTTCGACATGCTCGTACATTACTTGCAGCAAAACAGTTTAGCCAGGCAGCACAAGTTGCACACTCCCTCTTTTGCACATGCTACAAATTCAATATGCAGGTCCAAAATGCATCTGTTCTGTTATTGCTGGCTGAAATCCACAAGAAATCAGGAAATGCTGCTCTTGGTCTCCCTTATGCATTGGCAAGCATTTTGTTTTGCCAATCATTTCACTTAGACCTTCTTAAGGCATCTGCAACTCTCACACTGGCTGAGCTGTGGCTCTTACATGGACCAAGTGAAGCACAAAGAGCTTTACACCTTCTTCATGGAGTATTCCCAATGATTCTTGGTCATGGAGGTTTGGAGCTTTGTGCACGGGCACATATGGCAGAGGCAAAATGTCATCTTTCTGATCCATGTTATTCAGTTTGTCAAGATCCAGAGGTGGTACTCAACCCTTTAATGGAAGCTTGTGAGCAACTTGAACTTTTGGAGTATCACGAACTGGCGGCGGAGGCTTTCTATCTGAGAGCTATGGTTTACGATAAATTGGGCAACTTACAAGAGAGGGAGAAGGCTGCATCCTCCTTTCAGGAGCATAATAGTGCTTTAAGAAATCTTCAAGAATCAGAATTTGATATGTTAGACACAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53838.p1 GENE.R_Transcript_53838~~R_Transcript_53838.p1 ORF type:complete len:918 (+),score=183.56,ANAPC5|PF12862.3|4e-22,ANAPC5|PF12862.3|2.6e+03 R_Transcript_53838:377-3130(+)
MAGMLKPPRSTFSITPHKVSMCILIQIYAYPGPFFYPDLFSSVSHHNSFGLFLLSSIKSYDDILELKLDELISQLREIGGLLDRRLTHRLSSLSSPDELFNLFSELQGILGPPDSSVLEDDQISLDPSSNLGIFMRRCLLAFSMLSFEGVCHLLSNIESYCKELLSGSTSDDLTHLEGSNDESERLVEYENMDLDNFVSKEVTEVAETRKGASKAISFHLHVPKVLNELVQGVEVSVDARHSAKARELRSSKLPAMVDLDMFDANTDIFLRTNLQMHGYLLEQADDIEKHGSSFPLNTIESILKQLQKLAPELHRVHFLRYLNMLHHDDYTGALENLHRYFDHSAGMEGFDLCSSSSDENSFGKYEIALLCCGMMHVHFGHPKLALEVLTEAVRASQQLSNDSCLAYTLTVICKLLSQFGIATTTRILGSSYSPMTSIGSTSTIHQQLYVLLRRALTRSESLKLTPSVSANHLEMAKFDMMHVQRPMLSFGPKASVSLRTRPADVSKDLRLSSHVISEFSSEGLTVSREGVFATQWLKNPQKPMGPLMVDPEDVSGNNCSTFDFCAQESSIPRSVLQLFGSSFLNRATAWEMYGSTSLARMNALVYATCFADASSLENLALACVKLVQNVAAYKGYREAFVAFRIVEEKFHVISKSQISLLKLQLLHEHALHRGHLKLAQQACDELSALASSVTGVDVDLKTEASLRHARTLLAAKQFSQAAQVAHSLFCTCYKFNMQVQNASVLLLLAEIHKKSGNAALGLPYALASILFCQSFHLDLLKASATLTLAELWLLHGPSEAQRALHLLHGVFPMILGHGGLELCARAHMAEAKCHLSDPCYSVCQDPEVVLNPLMEACEQLELLEYHELAAEAFYLRAMVYDKLGNLQEREKAASSFQEHNSALRNLQESEFDMLDTM*

Click here to download the sequence:
Link to NCBI Protein BLAST