Transcript Information: R_Transcript_53861.p1


Annotated TAIR IDAT3G09720.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2980483-2983268 | Reverse length=541
E-Value1.5E-258
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.81238642626
Replicate 219.880747453003
Replicate 323.558732024885
Condition 2: 8 Hour
Replicate 121.605174953452
Replicate 224.10053299012
Replicate 328.691255496741
Condition 3: 24 Hour
Replicate 130.842746711982
Replicate 228.835053843658
Replicate 331.606343959637


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53861.p1 GENE.R_Transcript_53861~~R_Transcript_53861.p1 ORF type:complete len:527 (+),score=121.75,DEAD|PF00270.25|1.1e-38,Helicase_C|PF00271.27|7.1e+02,Helicase_C|PF00271.27|3.1e-30,ResIII|PF04851.11|1.5e+03,ResIII|PF04851.11|1.1e-06,ResIII|PF04851.11|5.8e+03 R_Transcript_53861:244-1824(+)
ATGATGGAGGATACCTCCTTCTTATTTGCAGGCATTAAATTCGACCGAAAGAAGTTCGCCAAAGATTTCGAGAGGTTTAAGGAAAGAAAGGAAATCAAAGTTTTGGAATCGAATCAAACTGTTGCTCAGAGCGCCAAGTCTGAATCTGAAGAAGGGAACAAGTCCATTAAGAAGAGAAAACGGAAGGGAGCAAATGATTTAGTCGACGGATTCAGTGTCTTTAAGAGCTCAAAGCCAGTTACTCAGGCTGAGCTAGACAATGGGACAGAGGAGTCTTCTGAGCAGAAGAAGGATGCTTTTCGTCAGCTTGAGAGGGATGCAATCTTTCGGAAAAAGCATAACATTCATATTTCTGGGAGTAACATTCCATCTCCACTCCAAAGCTTTGAGGAGCTCAGTATAAGATACAAATGCAAATCATACTTGCTGCGGAATTTTGCTGAACTTGGATACAAGGAGCCCACCCCCATCCAAAGGCAGGCTATTCCAGTCCTTCTATCTGGGCGTGAATGCTTTGCTTGTGCTCCTACTGGCTCCGGGAAAACCTTGGCATTTATTTGCCCCATATTAATGAAATTAAAGCATGGAATGAAGGACGGTGTTCGTGCTGTGGTTCTTTGTCCTACACGTGAGTTAGCTGCTCAAACAACTAGAGAATGCAAGAAACTTGCTAAAGGAAAGAAGTTCTATATTAAATTAATGACTAAAGAGCTTGCAAGAAGTGGTGATTTCTCAAAATTGCCCTGTGATATACTTATCTCGACACCTCTTCGGTTAGAATCTGCAATTTGCAAAAGCAACCTTGATTTAAGCAGGGTTGAATATCTTGTTCTTGATGAATCCGATAAATTATTCGAGCTTGGTTTTGTGAAGCAGATTGATTTTGTTGTCAAAGCATGCTCAAACCCCTCAATAATACGGTCATTGTTCAGTGCTACTTTACCTGATACTGTTGAAGACCTTGCACGAACATTGATGCATGATGCTGTCCGGGTCATTGTGGGAAGAAAGAATACAGCTTCTGAAACTGTTAAGCAAAAATTGGTGTTTGCTGGAAGTGAAGAAGGGAAGCTTATTGCACTCCGTCAGAATTTTGCTGAGAGTCTGAATCCACCAGTTTTAATTTTTGTGCAAAGTAAGGAACGTGCAAAAGAGCTCTACAGAGAACTGGCATTTAGAGATGTCAGAGTGGATGTCATCCATGCTGATTTGTCCCAAGAACAGAGGGAGAATGCTGTTGATGATTTCAGGGCTGGTAAAACTTGGGTTTTGATAGCTACTGATGTTATTGCTCGTGGTATGGACTTCAAAGGTGTTAATTGTGTGATCAATTATGATTTCCCAGATTCTGCTTCGACTTACATCCATAGAATTGGTCGATCTGGCAGAGCTGGGAGGACAGGAGAAGCCATTACCTTTTATACAGAAGATGATATACCATACTTGCGTAACATAGCCAATGTGATGTCACAATCTGGCTGTGAGGTTCCTTCTTGGATCATGTCCATGCCCAAAACTAAGTGGAAGAAGCACAGACCACAAAGGGATTCCATATCATGCGGTCCAAATACTGATGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53861.p1 GENE.R_Transcript_53861~~R_Transcript_53861.p1 ORF type:complete len:527 (+),score=121.75,DEAD|PF00270.25|1.1e-38,Helicase_C|PF00271.27|7.1e+02,Helicase_C|PF00271.27|3.1e-30,ResIII|PF04851.11|1.5e+03,ResIII|PF04851.11|1.1e-06,ResIII|PF04851.11|5.8e+03 R_Transcript_53861:244-1824(+)
MMEDTSFLFAGIKFDRKKFAKDFERFKERKEIKVLESNQTVAQSAKSESEEGNKSIKKRKRKGANDLVDGFSVFKSSKPVTQAELDNGTEESSEQKKDAFRQLERDAIFRKKHNIHISGSNIPSPLQSFEELSIRYKCKSYLLRNFAELGYKEPTPIQRQAIPVLLSGRECFACAPTGSGKTLAFICPILMKLKHGMKDGVRAVVLCPTRELAAQTTRECKKLAKGKKFYIKLMTKELARSGDFSKLPCDILISTPLRLESAICKSNLDLSRVEYLVLDESDKLFELGFVKQIDFVVKACSNPSIIRSLFSATLPDTVEDLARTLMHDAVRVIVGRKNTASETVKQKLVFAGSEEGKLIALRQNFAESLNPPVLIFVQSKERAKELYRELAFRDVRVDVIHADLSQEQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASTYIHRIGRSGRAGRTGEAITFYTEDDIPYLRNIANVMSQSGCEVPSWIMSMPKTKWKKHRPQRDSISCGPNTDE*

Click here to download the sequence:
Link to NCBI Protein BLAST