Transcript Information: R_Transcript_53882.p1


Annotated TAIR IDAT1G13830.1
Annotated Gene NameCarbohydrate-binding X8 domain superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4739999-4740926 | Reverse length=197
E-Value6.6E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.060824523616
Replicate 214.918423980001
Replicate 317.240334085525
Condition 2: 8 Hour
Replicate 112.371805447029
Replicate 210.945063217001
Replicate 311.94184909236
Condition 3: 24 Hour
Replicate 121.749501584141
Replicate 221.474857340825
Replicate 322.924490698382


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53882.p1 GENE.R_Transcript_53882~~R_Transcript_53882.p1 ORF type:complete len:190 (+),score=25.05,X8|PF07983.9|1.2e-19 R_Transcript_53882:186-755(+)
ATGGCTGTTTTAGTGTTCTTGGCTCTTTTCTTGGCCCTGACTGGCCATTCAGGTGCAACATATTGTATATGTAAAGATGGAATAGGAGATACAGCTTTGCAAAAGACAATAGACTATGCTTGTGGAGCAGGAGCTGATTGTAGAGCAATCCTTCAAAATGGAGCTTGTTTCCAACCTAACACTGTCAAAGCTCACTGTGATTATGCTGCCAACAGTTATTTCCAGAACAAGGGCCAAAGTCCTATGGCCTGTGATTTCTCTGGCACTGCCACCCCTTCCAATTCTCCCCCTAGCACTGTGGTTTCTGGCTGCTCCTATCCTACAAGTCCTGGCCAATCCTCATCCACTGGCGGCATTCCAACCACTAGCCCAGGAGGCATCGGCACGACCACTGGTGGCACAACCACTGGGGTACCTGGCTCCACTGGTGTATTTAACGGTATGGCTCCCACCGGCGGCATGGGTGACATTCCCAGTGGTGCTTCATCACTCCTTCGACAATATCCAGGCTACGTTTTCTCTACTGCATTAACCCTCTTTCCCGGCTTGTTGGTATGGTTAACTTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53882.p1 GENE.R_Transcript_53882~~R_Transcript_53882.p1 ORF type:complete len:190 (+),score=25.05,X8|PF07983.9|1.2e-19 R_Transcript_53882:186-755(+)
MAVLVFLALFLALTGHSGATYCICKDGIGDTALQKTIDYACGAGADCRAILQNGACFQPNTVKAHCDYAANSYFQNKGQSPMACDFSGTATPSNSPPSTVVSGCSYPTSPGQSSSTGGIPTTSPGGIGTTTGGTTTGVPGSTGVFNGMAPTGGMGDIPSGASSLLRQYPGYVFSTALTLFPGLLVWLTY*

Click here to download the sequence:
Link to NCBI Protein BLAST