Transcript Information: R_Transcript_539.p1


Annotated TAIR IDAT2G32730.1
Annotated Gene Name26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13880189-13885464 | Forward length=1004
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.164316584663
Replicate 239.916043648567
Replicate 357.209634356025
Condition 2: 8 Hour
Replicate 154.989235166241
Replicate 262.458567060894
Replicate 384.846539553237
Condition 3: 24 Hour
Replicate 181.992168670372
Replicate 267.8182685966
Replicate 379.460458373811


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_539.p1 GENE.R_Transcript_539~~R_Transcript_539.p1 ORF type:complete len:1001 (+),score=253.16,PC_rep|PF01851.18|4.7e+03,PC_rep|PF01851.18|0.0043,PC_rep|PF01851.18|0.0001,PC_rep|PF01851.18|4.6e-06,PC_rep|PF01851.18|0.016,PC_rep|PF01851.18|2.4e+02,PC_rep|PF01851.18|42,PC_rep|PF01851.18|9.4e+03,PC_rep|PF01851.18|2.4e-06,PC_rep|PF01851.18|0.01,HEAT_2|PF13646.2|0.098,HEAT_2|PF13646.2|8.9e+02,HEAT_2|PF13646.2|14,HEAT_2|PF13646.2|1.3e-10 R_Transcript_539:237-3239(+)
ATGGCTACTATGGTGAGCTCTGCAGAAGCCTTGATGGCAATGCTTAGTGAGAATCATCCTGCATTGAAGCTTCACGCTCTCTCTAACCTCAACGCTTTCGCTCAGTTCTTTTGGCCTGAGATCTCTACTAGTATCCCTCTCATTGAAAGTCTGTATGAAGATGAAGAATTTTCTCAGAGAGCACTTGCTGCCTTAGTGGTTTCCAAGGTTTTCTACTTCTTGGGTGAGCTGAATGACTCCCTAACATATGCATTAGGAGCTGGGGCTCAATTTGATGTTTCAGAGGATTCTGATTATGTTCGTACTCTTCTTGACAAAGCCATCGATGAATACGCTAGTCTTAGGAACAAAGCAGCAGAGTCAAATGAAGAATCAGGGAAAATTGATCCCAGGCTGGAGGCAATTGTGGAGAGAATGCTGGAGAAGTGCATTGTTGATGGAAAATACCAACAAGCTATGGGGATTGCAATTGAGTGCCGGAGGCTAGATAAACTTGAGGAGGCAATTATGAGGAGTGATAATGCTCCTGGAAGCTTGTCATACTGCATTAATGTCTCCCACTCTTATGTTAATCGCAGAGAATATCGACAGGAGGTGCTCCGGCTGCTTGTCAGAGTATATCAGAAGTTGCCATCTCCCGATTATCTGAGCATTTGTCAATGTCTGATGTTTTTGGATGAACCAGAAGAAGTTGCAAGTATTCTTGAAAAGCTTCTTCGTTCAGAGAACAAGGATGATGCTTTGCTTGCGTTCCAAATAGCTTTTGATCTTGTGGAGAATGAGCATCAAGCTTTTCTCTTGAATGTAATTAATCGCCTTTCTAAGCCCAAATCTCAGTCTCTAGAGCAGACAGTATCCAGGGATCCCGAGTCCACTGAGACTGGAAGTGCAGCTGCCCCTGAGGACGTGCAAATGGCAGATGGGGCTCAGGCTTCTGGTGCCCAGACTGAGTTGGACCCTGCTGAAGCTAGATATGCTGAAAGATTGACAAAAATTAAAGGAATTTTGTCTGGGGAGACTTCGATACAGCTGACTTTGCAGTTTCTCTATAGTCACAACAAGTCTGACCTCCTTATTTTGAAGACTATCAAGCAATCTGTTGAGATGCGGAATAGTGTTTGTCACAGTGCAACAATTTATGCCAATGCAATTATGCATGCTGGTACAACAGTGGATACATTTCTAAGGGACAATTTGGACTGGCTGAGCAGGGCCACTAACTGGGCTAAATTCAGTGCAACAGCTGGGTTGGGTGTTATCCATAGAGGCCATCTTCAGCAGGGTCGCTCACTAATGGCTCCTTACCTGCCTCAAGGTGGCGCTGGAGGTGGTGGCAGTCCATACTCTGAAGGTGGAGCTCTGTATGCTCTTGGTTTGATTCATGCTAACCATGGTGAGGGTATTAAGCAATTCCTTCGTGATAGCCTGCGCAGTACTAACGTGGAGGTTATCCAACATGGAGCATGCTTAGGTCTTGGATTAGCAGCCCTAGGAACTGCGGATGAAGACATATTTGAGGATATTAAGAATGTGCTCTACACAGACAGTGCTGTTGCTGGTGAAGCTGCTGGAATCAGCATGGGCCTTCTTATGGTTGGAACAGCCAGTGAGAAGGCCAGTGAGATGCTTGCTTATGCACATGAGACTCAGCATGAGAAGATTATGAGGGGATTGGCCTTAGGTATAGCGCTTACAGTGTACGGACGGGAGGAGGAAGCAGACACTCTTATCGAGCAGATGACTAGGGACCAAGATCCTATACTACGATATGGTGGTATGTATGCATTAGCTTTGGCATACAGAGGAACATCAAATAACAAGGCCATCCGACAGCTGTTGCACTTTGCTGTTTCTGATGTTAGTGACGATATCAGACGAACTGCTGTTTTGGCACTGGGTTTTGTTTTGTACTCTGAACCGGAGCAGACGCCTCGAATTGTGTCTCTGCTCTCTGAGTCCTACAATCCACATGTTCGATATGGTGCAGCCCTAGCAGTTGGTATTTCATGTGCTGGGACTGGTCTTAGTGAGGCAATATCTTTGCTTGAGCCCTTAACGTCAGATGTTGTTGACTTTGTTCGTCAAGGTGCTTTGATTGCCATGGCCATGGTTATGGTTCAGACTACTGAAGCTATGGATTCTCGTGTTGGAACATTCAGGCGGCAGTTGGAGAAAATAATTCTCGATAAGCATGAAGATACCATGAGCAAGATGGGAGCCATCTTGGCCTCTGGAATCCTTGATGCTGGTGGGAGGAATGTGACGATTAGGTTGCTTTCCAAGTCAAAGCACGATAAAGTCACGGCTCTGGTTGGTCTAGCTGTTTTTACCCAGTTCTGGTATTGGTATCCTCTCATATATTTCATAAGCTTGTCCTTCTCACCTACTGCTTTGATCGGGCTGAACGACGACTTGAAAGTTCCGAGATTTGAGTTCTTATCACATGCAAAACCTTCCTTGTTTGAGTACCCTAAACCTACCACTGTGCCTACCAACACATCCGCTGTGAAACTCCCTACAGCAGTACTATCAACATCGGCGAAGGCCAAAGCTAGGGCGAAAAAGGAGGCCGAGCAGAAGGAGAAGGAGAATGCTGCTGGGTCTGAGCCCTCGGCTTCAGCATCAACTTCCACCACTGGAAAAGGAAAGGCTTCTGCTGACAAGGATAGCGACTCCATGCTGGTTGACAACCCGCCCGAGAAGAAGGCTGAGCCAGAACCCTCTTTTGAAACACTGACCAATCCGGCTAGGGTGGTTCCTGCCCAAGAAAAATTCATCAAGTTTTTGGAGGGAAGTAGATATGTGCCTGTAAGGATGGCTCCATCAGGCTTTGTTCTCCTGAAAGACTTGCGTCCTGAGGAACCCGAGGTATTGTCTCTTACAGATGCTCCGGCCTCTGCTACAACTGCTCCTGCTGGTGGATCCACTGCATCGGCGCAGCCGGCTGCCATGGCTGTCGATGAGGAGCCCCAACCCCCTCAGCCTTTTGAATACACTTCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_539.p1 GENE.R_Transcript_539~~R_Transcript_539.p1 ORF type:complete len:1001 (+),score=253.16,PC_rep|PF01851.18|4.7e+03,PC_rep|PF01851.18|0.0043,PC_rep|PF01851.18|0.0001,PC_rep|PF01851.18|4.6e-06,PC_rep|PF01851.18|0.016,PC_rep|PF01851.18|2.4e+02,PC_rep|PF01851.18|42,PC_rep|PF01851.18|9.4e+03,PC_rep|PF01851.18|2.4e-06,PC_rep|PF01851.18|0.01,HEAT_2|PF13646.2|0.098,HEAT_2|PF13646.2|8.9e+02,HEAT_2|PF13646.2|14,HEAT_2|PF13646.2|1.3e-10 R_Transcript_539:237-3239(+)
MATMVSSAEALMAMLSENHPALKLHALSNLNAFAQFFWPEISTSIPLIESLYEDEEFSQRALAALVVSKVFYFLGELNDSLTYALGAGAQFDVSEDSDYVRTLLDKAIDEYASLRNKAAESNEESGKIDPRLEAIVERMLEKCIVDGKYQQAMGIAIECRRLDKLEEAIMRSDNAPGSLSYCINVSHSYVNRREYRQEVLRLLVRVYQKLPSPDYLSICQCLMFLDEPEEVASILEKLLRSENKDDALLAFQIAFDLVENEHQAFLLNVINRLSKPKSQSLEQTVSRDPESTETGSAAAPEDVQMADGAQASGAQTELDPAEARYAERLTKIKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRDNLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHGACLGLGLAALGTADEDIFEDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKASEMLAYAHETQHEKIMRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYRGTSNNKAIRQLLHFAVSDVSDDIRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQTTEAMDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKSKHDKVTALVGLAVFTQFWYWYPLIYFISLSFSPTALIGLNDDLKVPRFEFLSHAKPSLFEYPKPTTVPTNTSAVKLPTAVLSTSAKAKARAKKEAEQKEKENAAGSEPSASASTSTTGKGKASADKDSDSMLVDNPPEKKAEPEPSFETLTNPARVVPAQEKFIKFLEGSRYVPVRMAPSGFVLLKDLRPEEPEVLSLTDAPASATTAPAGGSTASAQPAAMAVDEEPQPPQPFEYTS*

Click here to download the sequence:
Link to NCBI Protein BLAST