Transcript Information: R_Transcript_5390.p1


Annotated TAIR IDAT5G13870.1
Annotated Gene Namexyloglucan endotransglucosylase/hydrolase 5
Annotated Gene Symbol(s)EXGT-A4, XTH5
Annotation TypeOrtholog
Chromosome Positionchr5:4475089-4476217 | Reverse length=293
E-Value8.5E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.45951505725
Replicate 231.86497357297
Replicate 337.998235306559
Condition 2: 8 Hour
Replicate 132.263727930488
Replicate 232.489045969252
Replicate 334.381285998615
Condition 3: 24 Hour
Replicate 138.217996737884
Replicate 237.364203296978
Replicate 323.303967931344


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5390.p1 GENE.R_Transcript_5390~~R_Transcript_5390.p1 ORF type:3prime_partial len:170 (+),score=11.48,Glyco_hydro_16|PF00722.17|8.4e-44 R_Transcript_5390:50-556(+)
ATGTTGATGATGAGATTGTTGGTTGTGGTTGTGGTTGTGGTTGTTCATCTGGTAGGCGGAGCAAACTGCGCTGCAACCAAAAAACCCGTTGATGTAGCCTTTGGTAGGAATTACGTTCCGACTTGGGCATTTGATCACATCAAATACTTCAATGGGGGCTCTGAGATTCAGCTTGTCCTCGACAATTACACAGGCACGGGATTCCAATCGAAGGGGTCGTATTTGTACGGTCACTTTAGTATGCATATCAAATTGGTGGCAGGAGATTCGGCTGGAACTGTGACTGCCTTCTATCTGTCATCACAAAACTCGGAGCACGACGAAATAGACTTTGAGTTCCTTGGGAATAGGACTGGAGAGCCCTACATTGTACAGACAAATGTATTTACAGGAGGCAAAGGAGATAGAGAGCAAAGAATATACCTTTGGTTTGATCCAACCAAAGAGTACCACACTTATTCTGTGCTTTGGAACCTACATCAAATAGTATTCTTCGTAGACGACATA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5390.p1 GENE.R_Transcript_5390~~R_Transcript_5390.p1 ORF type:3prime_partial len:170 (+),score=11.48,Glyco_hydro_16|PF00722.17|8.4e-44 R_Transcript_5390:50-556(+)
MLMMRLLVVVVVVVVHLVGGANCAATKKPVDVAFGRNYVPTWAFDHIKYFNGGSEIQLVLDNYTGTGFQSKGSYLYGHFSMHIKLVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGEPYIVQTNVFTGGKGDREQRIYLWFDPTKEYHTYSVLWNLHQIVFFVDDI

Click here to download the sequence:
Link to NCBI Protein BLAST