Transcript Information: R_Transcript_53900.p1


Annotated TAIR IDAT2G40490.1
Annotated Gene NameUroporphyrinogen decarboxylase
Annotated Gene Symbol(s)HEME2
Annotation TypeOrtholog
Chromosome Positionchr2:16912961-16914988 | Forward length=394
E-Value2E-220
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.286531913376
Replicate 235.618723920506
Replicate 342.599519662233
Condition 2: 8 Hour
Replicate 137.041117126828
Replicate 239.416758551682
Replicate 343.712041902156
Condition 3: 24 Hour
Replicate 145.154258603469
Replicate 241.466137250907
Replicate 339.029350959544


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53900.p1 GENE.R_Transcript_53900~~R_Transcript_53900.p1 ORF type:complete len:392 (+),score=89.29,URO-D|PF01208.13|2.4e-118 R_Transcript_53900:266-1441(+)
ATGTCTTGCATCTACAGTGGCAGCTGTTCTATACCTTCTTTCTCTGCTCATTTTATTTCCAAATCCAAGCTTCCAAATTCAAAACCCCCTTCAATTCAATGTTCAGCTGGAGGTATATTGGCAGAGCCAAAGTCAGCAAGTACATCTGAACCCTTGTTACTGAATGCTGTCAAGGGTTTGGAAGTTGAAAGACCTCCTGTCTGGCTTATGAGGCAAGCTGGGAGGTATATGAAGAGTTACCAAGCCATTTGTGAGAAGTATCCTTCTTTTCGTGAAAGATCAGAAAATGTTGACCTTGTTGTGGAAATATCCCTTCAACCATGGGAAGTTTTCAAGCCTGATGGAGTTATACTTTTTTCGGACATTTTGACCCCACTCTCTGGAATGAATATACCTTTTGACATTGTGAAAGGCAAGGGACCAGTCATATTCGATCCTTTACGCTCGCAGGATGATGTGGATCAAGTGAGAGAGTTTGTTCCTGAAGAGTCTGTTCCATATGTTGGGGAAGCCTTAACTATATTGCGGAAAGAGGTTGACAACAAGGCTGCAGTTCTTGGCTTTGTTGGGGCTCCTTTCACCCTGGCATCATATGTTGTTGAAGGCGGTTCATCAAAACACTTCAGCAAAATAAAGAGATTAGCTTTTTCTGAACCCAAGGTTTTGCATGCTCTTCTTAATAAGTTCACACTGTCCATGGCAAACTATATCAAGTACCAAGCAGATAATGGTGCACAAGCTGTTCAGATCTTCGACTCTTGGGCAACTGAGCTCAGCCCTGTAGACTTTGAGGAGTTCAGTTTGCCGTACTTGAAGCAGATTGTTGATTCTGTAAGGCGGACCCACCCAAATCTCCCTCTAATTCTCTATGCTAGTGGGTCAGGTGGTTTGCTTGAGCGGCTGCCTCTGACAGGAGTTGACGTTGTGAGCTTAGATTGGACCGTGGACATGGCAGAAGGTAGGAGGCGTTTAGGGTCTAATGTGGCGGTTCAGGGCAATGTGGATCCTGGTGTGCTTTTTGGTTCGAAGGAATTCATAACCAGTCGTATAATGGATACAGTGAAAAAAGCAGGCAAGGGAAAGCATATACTTAATCTTGGTCATGGTATTGTCGTAGGTACACCTGAAGAAAATGTTGCTCATTTCTTTGAGGTAGCTAAGGACATTAGATACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53900.p1 GENE.R_Transcript_53900~~R_Transcript_53900.p1 ORF type:complete len:392 (+),score=89.29,URO-D|PF01208.13|2.4e-118 R_Transcript_53900:266-1441(+)
MSCIYSGSCSIPSFSAHFISKSKLPNSKPPSIQCSAGGILAEPKSASTSEPLLLNAVKGLEVERPPVWLMRQAGRYMKSYQAICEKYPSFRERSENVDLVVEISLQPWEVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPLRSQDDVDQVREFVPEESVPYVGEALTILRKEVDNKAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSEPKVLHALLNKFTLSMANYIKYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVRRTHPNLPLILYASGSGGLLERLPLTGVDVVSLDWTVDMAEGRRRLGSNVAVQGNVDPGVLFGSKEFITSRIMDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAKDIRY*

Click here to download the sequence:
Link to NCBI Protein BLAST