Transcript Information: R_Transcript_53917.p1


Annotated TAIR IDAT5G15550.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5059051-5062003 | Reverse length=433
E-Value5E-231
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.460516868434
Replicate 212.080063253213
Replicate 313.388412841587
Condition 2: 8 Hour
Replicate 110.509914634891
Replicate 211.742015578705
Replicate 315.665088617594
Condition 3: 24 Hour
Replicate 118.712185343129
Replicate 219.537535272931
Replicate 321.637845044353


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53917.p1 GENE.R_Transcript_53917~~R_Transcript_53917.p1 ORF type:complete len:438 (+),score=77.84,WD40|PF00400.28|2.8,WD40|PF00400.28|4.2e-05,WD40|PF00400.28|3.9e-05,WD40|PF00400.28|0.059,WD40|PF00400.28|0.041,WD40|PF00400.28|0.001,WD40|PF00400.28|15,NLE|PF08154.8|1.6e-22 R_Transcript_53917:186-1499(+)
ATGGACATGGACATGGACATGGATGAGAATGTAAAGAGAGTTCAAGTCCGTTTTGTAACGAAGCTTGAGGACCCTTACAAAGTGCCCGCCACTACCATTGCTATTCCTTCCAATCTCACTCGCTTGGGCCTTTCTTCCGTTGTCAACAGTCTTCTCAAAGCCGTTGATGCTGATTGGGAACATGAACCGTTTGATTTTCTAATCAATGGCGAGCTAATTCGTATGCAACTTGAGCAATTCCTTCTTGCCAAGGGTGTGTCTGCGGAAAAAGTATTGGAAATAGAGTATATTAGGGCAGTTGTCCCTAGGAAAAAAGAGGAGCCGTCTTTACATGATGATTGGGTTAGTGCTGTGAATGGTTCTAATGATGGTTTCATTTTTACAGGATGTTATGATGGTGTTGGAAGGATATGGAAGGGCGCTGGAACATGTACACATATATTACAAGGACATAGTGGTGCTCTCACTTCTGTGTGCACAATCAATAAAAGCTTGCAAAGTGATAACTTAATGCACCTGGCCACTGCTTCAAAGGACCGGACATTGAGGCTTTGGAAGTTTGACACAGAGGATACCTTGGATCATCCTGGAAAAATTACGGCATTTAAAGTTTTACGTGGACATAGTGCAACTGTTCAATGTGTGGCATCACAGCATTCTGGAAATATGGTGTGCTCAGGTGCCTGGGACAATACAATCAATCTTTGGCAGACAAATGAATCTGAATTTGATGAAGATGTTGTTTCTATTAAAAAGAGAAAAAAAAGTGACTATGCAGTAGAGCCACAAGCAGAGGGTGCTGCAGTATCTACTATTGTAGGCCACACCAATTGTGTTTCCTCTGTTGTTTGGGCTGAAGATGAAACTATTTATTCGGCATCGTGGGATCATTCTGTCAGAACGTGGGATGTTGAAACAGGGAAAGCCACTTGGACCTTGTTCTGTGGTAAAGTTCTTAACTCTATTGATGTTGGTGGAGAAAACTCTGCACTAGTAGCTGCTGGGGGTTCTGATAATACCCTAAGGATATGGGACCCTCGCAGACCAGGAACATTGGCTCCTATATACCAATTCTCATCTCATACAAATTGGATTTCTTCTTGCAAATGGCATAAAAAATCGTGGTTCCATTTAGTTTCTTCATCATATGATGGAAAAGTAATGCTATGGGACTTAAGAACTGCGTGGCCTCTGTCTGTGATTGAATCGCACAGTGATAAGGTATTATGTGCAGATTGGTGGAAAGGTGATAGTGTTATTAGTGGAGGGGCCGATTCAAAGCTTTGCATTTCTTCTGGGATCTCAGTGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53917.p1 GENE.R_Transcript_53917~~R_Transcript_53917.p1 ORF type:complete len:438 (+),score=77.84,WD40|PF00400.28|2.8,WD40|PF00400.28|4.2e-05,WD40|PF00400.28|3.9e-05,WD40|PF00400.28|0.059,WD40|PF00400.28|0.041,WD40|PF00400.28|0.001,WD40|PF00400.28|15,NLE|PF08154.8|1.6e-22 R_Transcript_53917:186-1499(+)
MDMDMDMDENVKRVQVRFVTKLEDPYKVPATTIAIPSNLTRLGLSSVVNSLLKAVDADWEHEPFDFLINGELIRMQLEQFLLAKGVSAEKVLEIEYIRAVVPRKKEEPSLHDDWVSAVNGSNDGFIFTGCYDGVGRIWKGAGTCTHILQGHSGALTSVCTINKSLQSDNLMHLATASKDRTLRLWKFDTEDTLDHPGKITAFKVLRGHSATVQCVASQHSGNMVCSGAWDNTINLWQTNESEFDEDVVSIKKRKKSDYAVEPQAEGAAVSTIVGHTNCVSSVVWAEDETIYSASWDHSVRTWDVETGKATWTLFCGKVLNSIDVGGENSALVAAGGSDNTLRIWDPRRPGTLAPIYQFSSHTNWISSCKWHKKSWFHLVSSSYDGKVMLWDLRTAWPLSVIESHSDKVLCADWWKGDSVISGGADSKLCISSGISVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST