Transcript Information: R_Transcript_53924.p1


Annotated TAIR IDAT3G45050.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16476023-16477107 | Forward length=158
E-Value4.6E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5495918719873
Replicate 26.0518748258742
Replicate 35.2550750955879
Condition 2: 8 Hour
Replicate 15.6173454878974
Replicate 25.3929185616977
Replicate 35.552257366236
Condition 3: 24 Hour
Replicate 14.3214695958031
Replicate 24.6705254121222
Replicate 34.50629214142


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53924.p1 GENE.R_Transcript_53924~~R_Transcript_53924.p1 ORF type:5prime_partial len:170 (+),score=41.25 R_Transcript_53924:3-512(+)
TTTCCCAAAAAAAAAAAAAAGGCCAAGAAAAAAAAAAGGAAAGAAAGGAAAGGAGAAACGGATGGCTTGAGGACCAACAAAGGTGAGCAAGCGAGGCTACAGGATAGAGGCAAAACCAGGACCCCCCCAGAAATGGAGTTCTTACACTTCCACTCCTCTTCCTTGTTAACCTCGTCCTTCAGATCAGGATCCAAGGGCTCGAAGTTGCAGGTCCACAGAAGGAAAACATTGAGAATCTCTTCGTCTCTGCCGGAAACAGTTGTATCTGTGGCGGTAGCAGCTACAATTGTTGGTGGAGCCGCCACTCTTCTTATAAAAAGAACCAAAGAGTCTGAAAAGAGTCAGACTCCTGTGAAAATATGTGAAGCATGTGGGGGTTCTGGCATCTGTCCAGAATGCAAGGGAGAGGGTTTTGTGCTTCAGAAATTATCAGAGGAAAGTGCTGAGAAAGCTAGGATGACTTCTAAGAATGCTGCTACTCGTTATACATCAGGGCTTCCAAGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53924.p1 GENE.R_Transcript_53924~~R_Transcript_53924.p1 ORF type:5prime_partial len:170 (+),score=41.25 R_Transcript_53924:3-512(+)
FPKKKKKAKKKKRKERKGETDGLRTNKGEQARLQDRGKTRTPPEMEFLHFHSSSLLTSSFRSGSKGSKLQVHRRKTLRISSSLPETVVSVAVAATIVGGAATLLIKRTKESEKSQTPVKICEACGGSGICPECKGEGFVLQKLSEESAEKARMTSKNAATRYTSGLPRK*

Click here to download the sequence:
Link to NCBI Protein BLAST