Transcript Information: R_Transcript_5393.p1


Annotated TAIR IDAT5G23520.1
Annotated Gene Namesmr (Small MutS Related) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7929591-7931296 | Reverse length=435
E-Value4.6E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.888724142204
Replicate 230.353853373451
Replicate 334.639456852718
Condition 2: 8 Hour
Replicate 129.8065185278
Replicate 236.04514655996
Replicate 340.327968606713
Condition 3: 24 Hour
Replicate 138.432692809128
Replicate 231.591346437501
Replicate 338.291350328075


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5393.p1 GENE.R_Transcript_5393~~R_Transcript_5393.p1 ORF type:complete len:451 (+),score=99.30,DUF1771|PF08590.6|1.7e-11,Smr|PF01713.17|4.5e-07 R_Transcript_5393:564-1916(+)
ATGATTGCGAGCAAGGCCAATACGAGGATGTCGTCTTTGAGACGGCCAAAGTCCACTGGTTGGGCTGCATTTGACCTGCAGCAAAGACACAATGACGGTCTTCAAGCTCAGAGTACTAACGAGCTATTTCCTTCCCTTCCAAGTACAGTGACTTCCTTCCAACCTGCGGAAACATTATTGAGAAACAATCGATCCCCTGTGAAACCGTTTTCATCAGTCGTAATGTCTTCTGTTGGGTTTCCAAAAAGTACAGCTGATTTTAATAAAACAGCGCCGTCTGAAGTTGATGGCTCTTTTGGCCCTCAGAGTAGCGGTGTTTCTAAGGAGAACAAATATGGCGAGGTCTTTAGACAGCTCAAAGAGCGATACAGCTGGGCAGACAATAGTTTGATTGCGGATGTCTTGGCTAATGCAGGCCACAATTCTGACATGGCATCATCCTTTTTGAATGCCATGGTATCTGATGAGAGTTCAGGAAGAACTGAGGACAATACGTTGGTCACCTCTAGCTGTGACTCCATTGAACATAAGAGAAATGACAGAACCTTGCATGGAAAGAAAGGTGTTTCATCAGGAAGGATTTCTGAACCTTCTAAGACATGCTCCATTTTTCAGTCACATGTTGGCAATGGCCAAGGTAATGTGAGGGATGGGAGTCAAGAGAATGATCCATGTGCTGAAAAGCATTTGAATGGTTGTATGGATGTTGATGCAATGTTTGGTCAGTTGACGCATGTACCTATTGAGCCTGAGTGGGAAGAGGATGATGTTTACTTGAGTTGCCGTAAAGATGCAATTAAAATGATGAGGGCTGCTGCTCGGCATTCCAAGGCAGCAACTAATTCTTTTCTAAGAGGTGATCACTTTTCTGCCCAGCAATTTTCTATGAAAGCTCAGGAGGAATGGGTTGTTGCACAAAGGCTCAACGCAAAAGCTGCCAATGAAATTTTAAGCTTAAGGAATGAGAATAATGGGATTTGGAGGTTGGACTTGCATGGTCTTCATGCAACAGAAGCAGTCCAAGCTTTGCAGGAACGTTTACATATGATTGAAACACAGGTATTCTTTAAGGTTCCAGGTATCGCTGGACTCCCTAACAATTTTAGGACCACACCAGAGGCTGTGAAAGCTTCGCCTTCTGGTGGCTGCAATAACATTGGAAGATTGGATGATCAGTCATTCCCTGGGCAAAAACCAAAGTGGTTGGAAGTCATTACAGGGATCGGTAATCATAGCCGTGGAGGGGCAGCACTTCCAATAGCTGTGAGGACTTTTCTTGCTGACAATGGTTATCGCTTTGATGAGGCTCGGCCAGGGGTTATAATGGTTCGGCCTAAGATTCGTCATAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5393.p1 GENE.R_Transcript_5393~~R_Transcript_5393.p1 ORF type:complete len:451 (+),score=99.30,DUF1771|PF08590.6|1.7e-11,Smr|PF01713.17|4.5e-07 R_Transcript_5393:564-1916(+)
MIASKANTRMSSLRRPKSTGWAAFDLQQRHNDGLQAQSTNELFPSLPSTVTSFQPAETLLRNNRSPVKPFSSVVMSSVGFPKSTADFNKTAPSEVDGSFGPQSSGVSKENKYGEVFRQLKERYSWADNSLIADVLANAGHNSDMASSFLNAMVSDESSGRTEDNTLVTSSCDSIEHKRNDRTLHGKKGVSSGRISEPSKTCSIFQSHVGNGQGNVRDGSQENDPCAEKHLNGCMDVDAMFGQLTHVPIEPEWEEDDVYLSCRKDAIKMMRAAARHSKAATNSFLRGDHFSAQQFSMKAQEEWVVAQRLNAKAANEILSLRNENNGIWRLDLHGLHATEAVQALQERLHMIETQVFFKVPGIAGLPNNFRTTPEAVKASPSGGCNNIGRLDDQSFPGQKPKWLEVITGIGNHSRGGAALPIAVRTFLADNGYRFDEARPGVIMVRPKIRHS*

Click here to download the sequence:
Link to NCBI Protein BLAST