Transcript Information: R_Transcript_53942.p1


Annotated TAIR IDAT5G24520.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)TTG1, TTG, URM23, ATTTG1
Annotation TypeOrtholog
Chromosome Positionchr5:8371708-8372733 | Reverse length=341
E-Value1.2E-176
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.820932096704
Replicate 29.5254781441352
Replicate 39.8799027970626
Condition 2: 8 Hour
Replicate 18.2923376498658
Replicate 213.502257725189
Replicate 317.687671690792
Condition 3: 24 Hour
Replicate 112.395748950422
Replicate 212.68353546423
Replicate 310.978816727933


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53942.p1 GENE.R_Transcript_53942~~R_Transcript_53942.p1 ORF type:5prime_partial len:313 (+),score=19.29,WD40|PF00400.28|4e+03,WD40|PF00400.28|3e+02,WD40|PF00400.28|0.07,WD40|PF00400.28|0.34 R_Transcript_53942:1-939(+)
TTACCTCACCGGAGTTCCGGCACCGATCAATTTATCGCGGTCGGGAGTTTCATCGAAGAACTCAACAACCGCGTCGACATCCTAACATTCGATGACGAAACCCTAACCCTAACCCTAAACCCTAACCTCTCCTTCGCACACCCTTACCCTCCCACAAAACTCATGTTCTCACCACCGTCATCCTCTATCCTCCTCGCATCATCGGCCGATTTCCTCCGATTATACTCTCTCCAAAACGACACCGTCTTGGAGCCCTCCGTGGTCCTCAATAACTCGAAATCGAGCGAGTTTTGCGCCCCGCTGACATCATTCGACTGGAACGACGTCGTTCCGAACAGGATCGGGACGTCAAGTATTGACACAACCTGCACAATTTGGGACATTGAGAAGCAGGTGGTGGAAACTCAATTAATCGCTCATGATAAGGAGGTTTATGACATCGCTTGGGGTGAGGCCGGTGTTTTCGCTTCGGTTTCGGCTGATGGAAGTGTCAGGATATTTGATCTGAGAGATAAGGAGCATTCGACGATAGTTTATGAGTCGCCGGAACCGGACACTCCCTTGCTGAGGTTAGCTTGGAACAAACAGGACTTGAGGTACATGGCTACTACTCTTATGGATAGTAATAAGATTGTGATTTTGGATATCCGGTCCCCGACGATTCCGGTGGCTGAGCTGGAACGGCACCAGGCAAGTGTTAATGCCGTGGCGTGGGCTCCACTGAGCGGCCGCCATATTTGCTCCGGTGGGGATGACTCTCAGGCACTTATTTGGGAGTTGCCGTCTGGTGGTGGTGGGCCTAACGGGCCGAATATGGGGATTGATCCTATGTCGATGTACTCTGCTGGGTCGGAGATTAATCAGTTGCAATGGTCTGCTTCTCAGCCTGATTGGATTGGCATTGCCTTTTCCAACAAGTTGCAGCTCTTGAGAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53942.p1 GENE.R_Transcript_53942~~R_Transcript_53942.p1 ORF type:5prime_partial len:313 (+),score=19.29,WD40|PF00400.28|4e+03,WD40|PF00400.28|3e+02,WD40|PF00400.28|0.07,WD40|PF00400.28|0.34 R_Transcript_53942:1-939(+)
LPHRSSGTDQFIAVGSFIEELNNRVDILTFDDETLTLTLNPNLSFAHPYPPTKLMFSPPSSSILLASSADFLRLYSLQNDTVLEPSVVLNNSKSSEFCAPLTSFDWNDVVPNRIGTSSIDTTCTIWDIEKQVVETQLIAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIVYESPEPDTPLLRLAWNKQDLRYMATTLMDSNKIVILDIRSPTIPVAELERHQASVNAVAWAPLSGRHICSGGDDSQALIWELPSGGGGPNGPNMGIDPMSMYSAGSEINQLQWSASQPDWIGIAFSNKLQLLRV*

Click here to download the sequence:
Link to NCBI Protein BLAST