Transcript Information: R_Transcript_53958.p1


Annotated TAIR IDAT5G17420.1
Annotated Gene NameCellulose synthase family protein
Annotated Gene Symbol(s)IRX3, CESA7, ATCESA7, MUR10
Annotation TypeOrtholog
Chromosome Positionchr5:5736859-5741407 | Reverse length=1026
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7733172816978
Replicate 23.6561785857301
Replicate 35.7150210906898
Condition 2: 8 Hour
Replicate 15.5604357263092
Replicate 25.1917322401123
Replicate 37.0055605143856
Condition 3: 24 Hour
Replicate 18.6267116772126
Replicate 25.2330705921635
Replicate 37.1547384974481


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53958.p1 GENE.R_Transcript_53958~~R_Transcript_53958.p1 ORF type:5prime_partial len:982 (+),score=188.40,Cellulose_synt|PF03552.10|0,zf-UDP|PF14569.2|4.3e-22,Glyco_trans_2_3|PF13632.2|2.1e+02,Glyco_trans_2_3|PF13632.2|5.6e-08,Glyco_trans_2_3|PF13632.2|9.7e+03 R_Transcript_53958:3-2948(+)
TTCCCGGTGTGCCGCCCTTGCTATGAGTATGAACGACGAGAAGGCAGCCAGCTCTGTCCTCAGTGCAAGACTAGATACAAGAGGCTTAAAGGGAGTCCAAGGGTGGAGGGAGACGAAGATGAAGAAGATATTGATGACATTGAGCATGAATTCAATATTGATGATGAGAACAACAAGAACAACCAAGTTGCTGAGGCTATGCTTCAGGGAAAGATGAGCTATGGAAGAGGCCCAGATGATGAAGAAAATTCTCAGTTTCCTCCTGTTATAGCTGGTCTTCGTTCTCGACATGTGAGCGGAGAGTTTCCCATATCTGGCCGCAGTGGAGATCAGACGCCTTCACTGCATAGACGCGTACATCCTTATCCTGTGTCTGAGCCTGGAAGTGCAAGATGGGATGAAAAGAAAGAGGGAGGATGGAAAGATCGTATGGATGACTTGAAATTGCAGCAAGGGAATCTGGGACCTGACCATGATGATTATGCTGATCCAGAAATGGCCTTGGTGGATGAAGCAAGGCAACCTCTCTCTAGGAAGGTACCCATTGCGTCAAGCAAGATCAATCCTTACCGTATGGTGATTGTTCTTCGACTTTTTGTTCTGGCCATCTTCCTTCGCTATCGTATCATGAACCCTGTGCATGATGCCATTGGACTCTGGCTGACATCTGTTATCTGTGAGATATGGTTTGCCTTCTCATGGATCCTCGATCAGTTCCCCAAATGGTTCCCTATTGACCGAGAGACTTACTTAGATCGCCTTTCTTTAAGGTATGAGAAAGAAGGAGAACTAAATATGCTCGCTCCCATTGATATCTTTGTCAGTACAGTGGATCCAATGAAGGAACCTCCTCTTGTTACAGCTAATACTGTTCTCTCGATACTAGCAATGGACTACCCTGTTGAAAAGATATCATGCTACATTTCTGACGATGGAGCTTCCATGCTTACCTTCGAAGCACTCTCTGAAACTGCAGAATTCGCAAGGAAATGGGTTCCTTTCTGCAAGAAATTTGCCATAGAACCTAGAGCCCCAGAGTTTTACTTTTCTCAGAAAATTGATTATCTCAAGGACAAGGTTCAACCCACATTTGTGAAGGAGAGGCGATCCATGAAGAGAGAGTATGAAGAATTTAAGGTCCGAGTCAATGCATTGGTCGCAAAGTCTTCGAAAGTTCCTCCAGAAGGCTGGATCATGCAAGACGGAACACCATGGCCTGGGAACAATACAAAAGATCACCCTGGCATGATTCAGGTATTTCTGGGACACAGCGGAGGATATGATACTGAGGGTAATGAACTTCCTCGATTGGTTTATGTCTCTCGTGAAAAGAGACCTGGGTTCCAGCACCACAAGAAAGCTGGTGCAATGAATGCTCTGGTACGTGTCTCTGCAGTTCTGACGAATGCACCTTTCATGTTAAATCTGGACTGTGATCACTACCTAAACAACAGCAAGGCTGTCAGGGAAGCCATGTGTTTCTTGATGGATCCACAGACTGGAAAGAAAGTTTGTTATGTCCAATTTCCTCAAAGATTTGATGGCATTGACAGGCATGATCGATATGCCAACAGAAATACAGTGTTCTTTGATATTAACATGAAAGGTCTAGATGGAATTCAAGGTCCTGTCTATGTGGGAACAGGATGTGTCTTCAAGAGGCAAGCATTGTATGGCTATGAACCACCTAAGCGTCCAAAACGCCCAAAGATGGTAAGCTGCGACTGCTGCCCATGCTTTGGACGCCGCAAGAAGAACCAGAAGTACGCTAAACATGGAGCAGAGGGTGCTGCCAATGGAAATCTTCAAGGGTATGAGGATGATCAGGAACTCTTGAGGTCCCAGATGAATTTTGAGAAGAAATTTGGCCAGTCAGCAATCTTTGTGACTTCGACACTGATGGTTGATGGAGGTGTTCCCCCCTCATCAAGCCCAGCATCCTTGCTGAAGGAAGCCATTCATGTTATCAGCTGTGGCTATGAGGACAAAACAGAATGGGGTACTGAGTTGGGTTGGATCTATGGCTCGATTACAGAGGATATCCTCACAGGATTCAAGATGCACTGCCGGGGTTGGAGGTCTATCTACTGCATGCCAAAGAGGCCTGCATTTAAAGGGTCTGCTCCCATCAATCTCTCAGATCGACTTAACCAGGTCCTTCGGTGGGCCCTTGGTTCTGTTGAGATCTTCTTTAGTCGCCACAGTCCTTTGTGGTATGGGTACAAAGGAGGAAAGCTAAAGTTTCTTGAGCGGTTTGCATACATCAACACTACTGTCTATCCCTTCACCTCATTGCCTCTACTTGCCTATTGTATACTTCCTGCCATCTGTTTGCTCACTGGAAAGTTCATCATGCCAACGATCAGTACTTTTGCAAGTCTCTTCTACCTTGCCCTCTTCCTGTCAATATTTGCCACTGGTATCCTCGAGCTCAAGTGGAGTGGAGTTAGCATAGAAGAATGGTGGAGAAATGAGCAATTTTGGGTCATTGGTGGAGTGTCAGCACATCTCTTTGCTGTCATTCAGGGGCTTCTCAAGATTTTAGCTGGCATAGACACCAACTTTACTGTCACATCTAAGGCAGTTGATGATGAGGACGAGTTTGCTGATCTATACACCTATAAGTGGACAACACTCCTTATTCCCCCAACCACAATTCTAATCATCAACATCGTAGGCGTTGTTGCAGGAATCTCTGATGCCATAAACAACGGCTACGAGTCATGGGGACCTCTATTTGGGAAGCTCTTCTTTGCCTTCTGGGTGATTGTCCATCTTTATCCATTCCTAAAAGGTCTTATGGGAAGGCAGAACAGAACGCCAACGATTGTCATCATATGGTCTGTTCTCTTGGCTTCTATATTCTCATTACTTTGGGTGAGAATTGACCCCTTCATTGTAAAAGCAAAGGGTCCTGATACCAAAAAATGTGGAATCAATTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53958.p1 GENE.R_Transcript_53958~~R_Transcript_53958.p1 ORF type:5prime_partial len:982 (+),score=188.40,Cellulose_synt|PF03552.10|0,zf-UDP|PF14569.2|4.3e-22,Glyco_trans_2_3|PF13632.2|2.1e+02,Glyco_trans_2_3|PF13632.2|5.6e-08,Glyco_trans_2_3|PF13632.2|9.7e+03 R_Transcript_53958:3-2948(+)
FPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDEDEEDIDDIEHEFNIDDENNKNNQVAEAMLQGKMSYGRGPDDEENSQFPPVIAGLRSRHVSGEFPISGRSGDQTPSLHRRVHPYPVSEPGSARWDEKKEGGWKDRMDDLKLQQGNLGPDHDDYADPEMALVDEARQPLSRKVPIASSKINPYRMVIVLRLFVLAIFLRYRIMNPVHDAIGLWLTSVICEIWFAFSWILDQFPKWFPIDRETYLDRLSLRYEKEGELNMLAPIDIFVSTVDPMKEPPLVTANTVLSILAMDYPVEKISCYISDDGASMLTFEALSETAEFARKWVPFCKKFAIEPRAPEFYFSQKIDYLKDKVQPTFVKERRSMKREYEEFKVRVNALVAKSSKVPPEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGYDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYLNNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFKRQALYGYEPPKRPKRPKMVSCDCCPCFGRRKKNQKYAKHGAEGAANGNLQGYEDDQELLRSQMNFEKKFGQSAIFVTSTLMVDGGVPPSSSPASLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKFLERFAYINTTVYPFTSLPLLAYCILPAICLLTGKFIMPTISTFASLFYLALFLSIFATGILELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKILAGIDTNFTVTSKAVDDEDEFADLYTYKWTTLLIPPTTILIINIVGVVAGISDAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIIWSVLLASIFSLLWVRIDPFIVKAKGPDTKKCGINC*

Click here to download the sequence:
Link to NCBI Protein BLAST