Transcript Information: R_Transcript_5398.p1


Annotated TAIR IDAT3G11940.1
Annotated Gene Nameribosomal protein 5A
Annotated Gene Symbol(s)ATRPS5A, AML1, RPS5A
Annotation TypeOrtholog
Chromosome Positionchr3:3778175-3779354 | Reverse length=207
E-Value1.4E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1207.26717505161
Replicate 2245.23310530089
Replicate 3237.4062321917
Condition 2: 8 Hour
Replicate 1200.71965608071
Replicate 2214.29178431136
Replicate 3220.20769726312
Condition 3: 24 Hour
Replicate 1263.61201457074
Replicate 2293.00604903315
Replicate 3275.90027750063


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5398.p1 GENE.R_Transcript_5398~~R_Transcript_5398.p1 ORF type:5prime_partial len:228 (+),score=50.62,Ribosomal_S7|PF00177.17|5.4e-37 R_Transcript_5398:3-686(+)
GGGGAGGGTTTTGTGTATTTTCTCTCTTCTCATTTTCACTCTTTAACCCTAAACCATAAAGAGATGGAGGTAGCAGTGGCGGCACCACCAGTGACCACCGAAATCCTGGCCGAAGTCAAGCTCTTTAACCGGTGGCGCTTCGACGATGTCACGGTCAATGACATGGCCTTGGAGGATTATATTGGAGTTTCGGCTGTCAAGCATGCTACCTATGTGCCTCACACTGCTGGAAGGTACCAAATGAAGCGTTTCAGGAAGGCTCAATGCCCAATTATTGAGAGGCTCACCAACTCCCTCATGATGCACGGTCGCAACAACGGTAAAAAGTTGATGGCTGTTCGGATTGTCAAGCATGCTATGGAAATCATTCACCTCTTGACTGACTTGAACCCAATTCAAGTTATTGTTGATGCCATTGTCAACAGTGGGCCACGAGAGGATGCTACCAGGATTGGTTCAGCTGGTGTCGTAAGGCGTCAAGCTGTTGATATTTCTCCATTGAGGAGGGTTAACCAGGCTATCTACCTCCTGACCACAGGAGCCCGTGAGAGTGCATTCAGGAATGTGAAGACCATTGCTGAGTGCCTTGCCGATGAACTCATCAATGCTGCCAAGGGTTCATCCAACAGCTATGCTATCAAAAAGAAGGATGAGATAGAAAGAGTTGCCAAGGCCAACCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5398.p1 GENE.R_Transcript_5398~~R_Transcript_5398.p1 ORF type:5prime_partial len:228 (+),score=50.62,Ribosomal_S7|PF00177.17|5.4e-37 R_Transcript_5398:3-686(+)
GEGFVYFLSSHFHSLTLNHKEMEVAVAAPPVTTEILAEVKLFNRWRFDDVTVNDMALEDYIGVSAVKHATYVPHTAGRYQMKRFRKAQCPIIERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQVIVDAIVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR*

Click here to download the sequence:
Link to NCBI Protein BLAST