Transcript Information: R_Transcript_53980.p1


Annotated TAIR IDAT1G27980.1
Annotated Gene Namedihydrosphingosine phosphate lyase
Annotated Gene Symbol(s)DPL1, ATDPL1
Annotation TypeOrtholog
Chromosome Positionchr1:9748812-9752618 | Forward length=544
E-Value1.9E-204
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.420582310048
Replicate 218.621397541447
Replicate 326.852113994462
Condition 2: 8 Hour
Replicate 118.44308079574
Replicate 226.269724939388
Replicate 328.323978525899
Condition 3: 24 Hour
Replicate 121.482369745204
Replicate 217.519473000484
Replicate 320.087173710083


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_53980.p1 GENE.R_Transcript_53980~~R_Transcript_53980.p1 ORF type:complete len:389 (+),score=71.40,Pyridoxal_deC|PF00282.15|8.3e-16,Aminotran_5|PF00266.15|1.5e-08 R_Transcript_53980:440-1606(+)
ATGGGGGAATCTCTGATTTTCACTCTCCGAGCAAAAGCAAACTCAATTTTATCACAATATGAACCACTGGCTCTTGTTCTTGCTCCAATTGTATCTCTTTTAATCGCCAGCTTTCTTCAATCAGCACTTACTATTTTACATGAAAGAGGGCTCAAAGCTACTCTTATTGGGTTCTTCATGTATATGATCAAGTTGGTTCCTGGTGTGAGAAACTACCTTGATGCTGAAAAACAAAAGGTTGTGGATAAGTTGCAATCAGGTAATAAATCCAAAAGAGATGGTTGGAGGACTGAGTTACCCAATAATGGCTTGGGGAGTGCAGTAATTGAAGCCATGAAGGAGGATAAAAGGAAGGATGTGATGTGGCAGGGCAAATGTTCTGGTACAGTGTACATTGGAGGAACTGAGTCCGAAGGTCACTTTTCATTGATAAACGAGGCATGCTCAATGTTTGCACATACCAACCCATTACATTTGGATGTTTTCCAAAGTGTTGTTCGGTATGAGGCAGAAGTTGTTGCCATGACGGCTGCACTGCTTGGCAGTAAAGAAAAGGCTTCAGGAGGACAAATTTGTGGAAACATGACATCAGGTGGTACCGAGAGCATAGTGTTGGCTGTTAAATCATCACGTGACTATATGAGAGCTAAGAAGGGAATCACGAAACCAGAAATGATTATTCCAGTATCTGCTCACTCAGCATATGACAAGGCAGCTCACTACTTCAACATCAAGCTTAGGCGTGTCCCTGTCAATAAAGAATTTAAGGCAGATGTGAAAGCGATTAGGCGTTTTATCAACAAAAACACCATCTTGATTGTTGGATCTGCACCTGGGTTTCCACATGGTATCATTGATCCAATTGCGGAGCTTGGTCAACTAGCAACGAGCTTTGGTGTCTGTTTCCATGTTGATCTTTGTCTTGGAGGTTTTGTGCTGCCTTTTGCTCGTAAACTTGGGTATCCTATTCCACCATTTGATTTCACTGTTCAAGGAGTGACTTCAATATCTGTTGATGTACACAAGTATGGCTTGGCACCCAAAGGAACCAGCGTAGTTCTTTACCGGAATCATGAAATTAGGAAGGTAATCAGTTGTCATCCTCTCTTTATGTCTGCAGTTTTCTTTTCCTTGTTTTTGCTTATATTGCACGTCCTCTTAGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_53980.p1 GENE.R_Transcript_53980~~R_Transcript_53980.p1 ORF type:complete len:389 (+),score=71.40,Pyridoxal_deC|PF00282.15|8.3e-16,Aminotran_5|PF00266.15|1.5e-08 R_Transcript_53980:440-1606(+)
MGESLIFTLRAKANSILSQYEPLALVLAPIVSLLIASFLQSALTILHERGLKATLIGFFMYMIKLVPGVRNYLDAEKQKVVDKLQSGNKSKRDGWRTELPNNGLGSAVIEAMKEDKRKDVMWQGKCSGTVYIGGTESEGHFSLINEACSMFAHTNPLHLDVFQSVVRYEAEVVAMTAALLGSKEKASGGQICGNMTSGGTESIVLAVKSSRDYMRAKKGITKPEMIIPVSAHSAYDKAAHYFNIKLRRVPVNKEFKADVKAIRRFINKNTILIVGSAPGFPHGIIDPIAELGQLATSFGVCFHVDLCLGGFVLPFARKLGYPIPPFDFTVQGVTSISVDVHKYGLAPKGTSVVLYRNHEIRKVISCHPLFMSAVFFSLFLLILHVLLG*

Click here to download the sequence:
Link to NCBI Protein BLAST