Transcript Information: R_Transcript_54008.p1


Annotated TAIR IDAT1G55270.1
Annotated Gene NameGalactose oxidase/kelch repeat superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20618333-20619925 | Reverse length=434
E-Value4.3E-245
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.759916291925
Replicate 226.820449016623
Replicate 335.027552128382
Condition 2: 8 Hour
Replicate 128.309997701244
Replicate 236.538410654245
Replicate 342.734561134244
Condition 3: 24 Hour
Replicate 131.466644871538
Replicate 224.985677904011
Replicate 336.887670136659


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54008.p1 GENE.R_Transcript_54008~~R_Transcript_54008.p1 ORF type:complete len:429 (+),score=61.99,Kelch_1|PF01344.21|71,Kelch_1|PF01344.21|0.0076,Kelch_1|PF01344.21|6.3e-15,Kelch_1|PF01344.21|6.1,Kelch_1|PF01344.21|1.5e+03,Kelch_1|PF01344.21|4.7e+02,Kelch_6|PF13964.2|1.3e+02,Kelch_6|PF13964.2|5.7e-05,Kelch_6|PF13964.2|1.6e-08,Kelch_6|PF13964.2|23,Kelch_6|PF13964.2|3e+02,Kelch_4|PF13418.2|5.4e+03,Kelch_4|PF13418.2|0.19,Kelch_4|PF13418.2|0.00046,Kelch_4|PF13418.2|3.6e+02,Kelch_2|PF07646.11|27,Kelch_2|PF07646.11|0.0012,Kelch_2|PF07646.11|96,Kelch_2|PF07646.11|1.4e+04,Kelch_2|PF07646.11|5.2e+02,Kelch_2|PF07646.11|2e+03,F-box|PF00646.29|6.2e-07,Kelch_3|PF13415.2|7.7e+03,Kelch_3|PF13415.2|0.047,Kelch_3|PF13415.2|0.076,Kelch_3|PF13415.2|7.7e+03,Kelch_3|PF13415.2|1.2e+04 R_Transcript_54008:467-1753(+)
ATGGACAAGACGATTCAACCTCCTCTGGTTGACTCAACAGCATGTCTTTGTAGAGTAGATGCTGGCCTCAAGACTGTAGCTGGGGCGAAGAAATATGTCCCAGGGTCAAAGTTGTGTCTGCAACCTGACATCAAACCTTCCATTCATCCTACACGGCAAAAGCTTGCTCGTGGTGATAGGAGTCGTAGTCAGTCTCCTCTCCTTCCAGGTCTCCCTGATGATTTGGCAATTGCTTGCTTAATAAGGGTTCCTAGACTGGAGCATTGTAACCTCCGGCTAGTCTGCAAAAGATGGTACCGTCTTCTGGCTGGAAACTTTTTCTATTCATTAAGGAGGACTCTTGGAATCGCCGAAGAATGGGTCTATGTCATTAAGAGAGATCGAGATGGTAAGATATCATGGCATGCATTTGATCCAGTTTTCCAATTATGGCAGCCTCTTCCACCCGTGCCTAAAGAATACTCTGAAGCCCTTGGATTTGGATGTGCTGTTCTTAGTGGTTGTCATTTGTACTTGTTTGGAGGCAAACATCCTCTTAAGGGTTCAATGAGACGTGTTGTCTTTTACAGTGCCAGAACAAACAAATGGCATCGTGCCCCTGACATGCTACGTCGGAGACATTTTTTTGGTGCTTGCGTCATAAACAACTGTTTGTATGTAGCAGGTGGTGAGAATGAGGGTGTACACCGTTCCCTCAGATCAGCTGAAGTCTACGACCCTAACAAGAATAGATGGTCCGTAATCTCAGATATGAGCACAGCAATGGTGCCTTTCATTGGGGTTGTGTATGGGGGAAGGTGGTACTTGAAAGGGCTTGGGACACATCGTCAAGTTCTGAGTGAGGTATACCATCCGGAATCAAACAGCTGGCACCCAGTGTATGATGGAATGGTTGCTGGGTGGAGGAACCCTAGTGCTTCTTTGGATGATAAGCTCTATGCTTTGGACTGCAAAGACGGATGTAAACTTAGGGTATATGATGAGACGAGTGATTCCTGGAGTAAGCATATTGACAGCAGAACTCATCTGGGAAATTCAAAGGCCTTAGAAGCAGCAGCCCTTGTTCCTCTCAACGACAAGCTATGCATCGTCCGTAACAACATGAGCATTTCACTGGTAGATGTTTCGAGATCTGAACATTTGGGTGCGGCTACTACTGAACATCTGTGGGAAACCATAACAGGGAAAGGTCAGTTCAAGACGATGATGTCAAATATCTGGTCAAGTATTGCCGGTAGGAAACGCCTTAAAAGCCATATTGTCCATTGTCAGGTTCTTCAACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54008.p1 GENE.R_Transcript_54008~~R_Transcript_54008.p1 ORF type:complete len:429 (+),score=61.99,Kelch_1|PF01344.21|71,Kelch_1|PF01344.21|0.0076,Kelch_1|PF01344.21|6.3e-15,Kelch_1|PF01344.21|6.1,Kelch_1|PF01344.21|1.5e+03,Kelch_1|PF01344.21|4.7e+02,Kelch_6|PF13964.2|1.3e+02,Kelch_6|PF13964.2|5.7e-05,Kelch_6|PF13964.2|1.6e-08,Kelch_6|PF13964.2|23,Kelch_6|PF13964.2|3e+02,Kelch_4|PF13418.2|5.4e+03,Kelch_4|PF13418.2|0.19,Kelch_4|PF13418.2|0.00046,Kelch_4|PF13418.2|3.6e+02,Kelch_2|PF07646.11|27,Kelch_2|PF07646.11|0.0012,Kelch_2|PF07646.11|96,Kelch_2|PF07646.11|1.4e+04,Kelch_2|PF07646.11|5.2e+02,Kelch_2|PF07646.11|2e+03,F-box|PF00646.29|6.2e-07,Kelch_3|PF13415.2|7.7e+03,Kelch_3|PF13415.2|0.047,Kelch_3|PF13415.2|0.076,Kelch_3|PF13415.2|7.7e+03,Kelch_3|PF13415.2|1.2e+04 R_Transcript_54008:467-1753(+)
MDKTIQPPLVDSTACLCRVDAGLKTVAGAKKYVPGSKLCLQPDIKPSIHPTRQKLARGDRSRSQSPLLPGLPDDLAIACLIRVPRLEHCNLRLVCKRWYRLLAGNFFYSLRRTLGIAEEWVYVIKRDRDGKISWHAFDPVFQLWQPLPPVPKEYSEALGFGCAVLSGCHLYLFGGKHPLKGSMRRVVFYSARTNKWHRAPDMLRRRHFFGACVINNCLYVAGGENEGVHRSLRSAEVYDPNKNRWSVISDMSTAMVPFIGVVYGGRWYLKGLGTHRQVLSEVYHPESNSWHPVYDGMVAGWRNPSASLDDKLYALDCKDGCKLRVYDETSDSWSKHIDSRTHLGNSKALEAAALVPLNDKLCIVRNNMSISLVDVSRSEHLGAATTEHLWETITGKGQFKTMMSNIWSSIAGRKRLKSHIVHCQVLQL*

Click here to download the sequence:
Link to NCBI Protein BLAST