Transcript Information: R_Transcript_54037.p1


Annotated TAIR IDAT3G58730.1
Annotated Gene Namevacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21718495-21719280 | Reverse length=261
E-Value1.7E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.690206848789
Replicate 214.179319761656
Replicate 316.064465327172
Condition 2: 8 Hour
Replicate 111.924934227555
Replicate 214.665253675063
Replicate 318.269478221818
Condition 3: 24 Hour
Replicate 121.019810513677
Replicate 223.77385049244
Replicate 316.913226348966


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54037.p1 GENE.R_Transcript_54037~~R_Transcript_54037.p1 ORF type:5prime_partial len:154 (+),score=20.40 R_Transcript_54037:1-462(+)
CTAACAGAGCTCAAAGTTTTAACCCAAAGTCATAAGCTGCCGGGGATCAAGTTCCCCACCACTACGTTCATATACATCTGCGTCTGTGAAGCTCAACAGAGAGAGAAAGGAGTGCTGGGATTTCGTGCTTCTGCTTTGTCGCCGGCGCCGATCAAACAAGTTCGATTTTCAGGTTCTGGTGGCCTTATGATGATGTATCGTGGCCTTGTGATGATGTATCATGGAAAGGAACAGTATGCAGTAGCTATAGTTTCAATTTTGAAAGATGAGCTGGAGAAAGTCGGTGAACTTTCCTTCTTTCTTGAATTGCAGATCTTGTACAGGTTGAATATCTGTAATCATCAAGATGTCAGGGCAAAGCCAGCGTTTAAATGTTGTACCAACTGTCACAATGCTTGGTGTGATGAAAGCTCGTCTTGTTGGTGCAACGAGAGGACATGCCCTCTTGAAGAAGAAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54037.p1 GENE.R_Transcript_54037~~R_Transcript_54037.p1 ORF type:5prime_partial len:154 (+),score=20.40 R_Transcript_54037:1-462(+)
LTELKVLTQSHKLPGIKFPTTTFIYICVCEAQQREKGVLGFRASALSPAPIKQVRFSGSGGLMMMYRGLVMMYHGKEQYAVAIVSILKDELEKVGELSFFLELQILYRLNICNHQDVRAKPAFKCCTNCHNAWCDESSSCWCNERTCPLEEEK*

Click here to download the sequence:
Link to NCBI Protein BLAST