Transcript Information: R_Transcript_54053.p1


Annotated TAIR IDAT5G11560.1
Annotated Gene Namecatalytics
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3709734-3713994 | Reverse length=982
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 159.53102016361
Replicate 240.36928564273
Replicate 351.149836239628
Condition 2: 8 Hour
Replicate 143.018401590938
Replicate 245.768152863139
Replicate 358.923488799242
Condition 3: 24 Hour
Replicate 157.055872896522
Replicate 252.793513905929
Replicate 354.841725985583


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54053.p1 GENE.R_Transcript_54053~~R_Transcript_54053.p1 ORF type:complete len:983 (+),score=198.31,DUF1620|PF07774.9|1.1e-66,PQQ_2|PF13360.2|7e-11,PQQ_2|PF13360.2|14,PQQ_2|PF13360.2|1.9,PQQ_2|PF13360.2|8.7e+02 R_Transcript_54053:141-3089(+)
ATGGCAATGGCGATTAGGGTTTCTCTACTTCTCTTACTCTTCTTATCTTCCTTTATCCTCTCTTTCTCTCTCTACGAAGATCAAGTCGGCCTAATGGACTGGCACCAGCAATACGTAGGAAAAGTGAAGCAAGCGATGTTCCACACTCAAAAGGCTGGGCGAAAGAGACTCGTTGTTTCCACTGAAGAGAATGTTCTTGCTTCCCTAGATCTTCGTCGAGGCGAGATTTTTTGGAGGCATGTGCTTGGGGAGAAGGATGTAATCGATCATATTGATCTCACTCTCGGTAAATATGTGATTACACTCTCATCACAGGGAAGTGTCCTTAGAGCATGGAATCTTCCAGATGGGCAGATGGTGTGGGAGTCATTCCTCGCTGGCAAGAAGCCCTCAACTTCATCATTATTGACTGTGATTGATTTGAAGGTGGAGAGAGACAATGTGATTCTTGTTTACAGTAACGGTTGCCTCCATGCAGTTTCTAGCATAGATGGAGCAGTCTTATGGAACATTGATGAAAGTTTGGAGCTTCAACAGTTAATCAAGCCTGTTGATGGTGATGTAATGTATGCTGTAGGATTTTCAGGCTCCTCCCAAGTTCATGCCTATGGAATCAATGTGAAGACTGGTGAGATAGTCAAGCATGATATTGCTGAATTTCCTGGTGGCTTCTCCGGTGATGTTTCTCTGGTTTCCAGTGAGATATTAGTGGCTTTGGATGCTAGTCGGACGGTTCTGGTTACATTGAGCTTAAAAGACAGGAGAATCAACCTCCAGGAGGAGCATATTCGTGACCTTGCTCCTGGATTTTCCGGATCAGCTACTCTGCTACCTTCAAAATTGGAAGGGATGTTTGCAATTAGTTGCGATTCTTATATGTTATTTATTAGAGTAAATGATAATGGAAAACTTGAGGTCGTGGACAAAATTGATGGTGCTGTAGCTGTTAGTGATGTGCTCTCATACGCTGAAGGGCAGAAAGCTGTTGGAATCGTACAATATGGGGGTAATAAAATTCATCTGACAGTAAAGCTTGGTCATGACTATAGTGAGAACCTTTTAAAGGAAAGCATTCAGATGGACCATCACCGAGGTCATGTTCAGAAGGTTTTCATTAATAATTATATCCGGACTGACAGGTCTTATGGGTTTAGGGCTTTGGTTGTCATGGAAGATCACTCTTTATTGCTCCTGCAACAAGGTGAGATTGTCTGGAGTAGAGAAGATGGGCTTGCTTCAGTTGTAGATGTAACCACCTCAGAGCTACCTGTAGAAAAGAAAGGTGTATCGGTTGCCAAAGTAGAACAGGGGCTTCTTGAATGGCTGAAGGGCCACATGTTGAAGCTGAAAGGAACTCTAATGCTTGCAAGTCCTGAGGATATGGTTGCCATCCAAGCATTGAGGTTACAAAGTTCTGAGAAAAGCAAATTGACCCGTGATCATAATGGCTTCAGGAAGCTTCTGATAGTACTGACTAAAGCAAGGAAACTTTTTGCGCTGCACACTGGTGATGGCAGAGTTGTTTGGTCACTTTTGCTCCCTTCCTTGCAGAAGTCTGAAACATGTGAAAATCCTGTTGCTCTTAACCTTTACCAGTGGCAGGTACCTCATCATCATGCTTTGGATGAGAATCCATCTGTTCTCATTGTTGGCCGTTGTGGATATGGACTTGAAGCCCCAGGTGTTCTTTCTATTGTCGACACCTACACGGGGAAGGAGCTTAACTCACTTATCTTAACTCATTCTGTTCTTGAAGTCATTCCTCTGCCGTTCTCTGATTCAACAGAAAAGCGCCTTCATTTAGTTATAGATATGGAGAAAAATGTGCACTTATACCCTAAGACTCCTGAAGCTGCTGGTATCTTGCGGCGGGAGTTTCCTAACATATACTGGTACTCTGTTGATGCTGAAAACAGCATATTGAGAGGACATGCATTGAAGGGAAATTGCATGTCTGAGGAAGATGGTGAATTTTGCTTTACTTCAAGGGATCTCTGGTCGGTCATACTTCCTTCAGACTCTGAAAAGATTATTTCTACTGCTAATAGAAAATCAAATGAGGTAGTACATACTCAAGCTAAAGTAATGGGAGATCGAGATGTGATGTACAAATATATATCAAAAAATATATTATTTGTAGCTACTGCTGCACCCAAAGCTGCTGGTGAAATTGGATCAGCGACCCCTGAAGAGGCATGGTTGGTAGTTTACCTCATAGACGTTGTCACTGGTCGCATATTGCATCGTGTGACACATCATGGTGCACAGGGTCCTGTCCGTGCAGTTTTAAGTGAGAATTGGGTTGTGTACCACTACTTCAACCTTAGAGCACATCGATATGAGATGACCGTGATTGAAATCTATGATCAATCACGAGCGGACAACAAGGATGTCTGGAAGCTCATTCTTGGGAAGCATAATCTCACTTCACCAGTTTCTTCTTACTCTAGACCTGAGATCATGACAAAATCTCAGTCTTATTTCTTCACCCATTCTGTCAAGAATATAGAAGTAACATTAACTGCAAAGGGAATAACATCAAAGCAGCTTCTTATAGGAACTATTGGTGATCAGGTTTTGGCTCTTGACAAGCGCTTTCTTGACCCTCGTCGTTCTGTGAACCCAACTCCGGCTGAAAGGGAAGAAGGAATCATTCCTCTCACAGATTCCTTACCTATCATTCCTCAGTCTTATGTGACACATGCCCTCAAAGTCGAAGGTCTTAGAGGCGTTGTCTCAGCACCCGCCAAGCTCGAGTCCACTACCCTAGTCTTTGCATATGGAGTCGATTTGTTTTTCACTCGCCTTGCACCATCAAGAACCTATGACTCCCTTACAGAGGATTTTAGCTATGCTTTGCTTCTCTTGACCATTGTAGCTCTCGTGGCAGCGATCTTTGTCACCTGGATCTTGTCCGAGAGAAAGGAATTGAGGGATAAGTGGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54053.p1 GENE.R_Transcript_54053~~R_Transcript_54053.p1 ORF type:complete len:983 (+),score=198.31,DUF1620|PF07774.9|1.1e-66,PQQ_2|PF13360.2|7e-11,PQQ_2|PF13360.2|14,PQQ_2|PF13360.2|1.9,PQQ_2|PF13360.2|8.7e+02 R_Transcript_54053:141-3089(+)
MAMAIRVSLLLLLFLSSFILSFSLYEDQVGLMDWHQQYVGKVKQAMFHTQKAGRKRLVVSTEENVLASLDLRRGEIFWRHVLGEKDVIDHIDLTLGKYVITLSSQGSVLRAWNLPDGQMVWESFLAGKKPSTSSLLTVIDLKVERDNVILVYSNGCLHAVSSIDGAVLWNIDESLELQQLIKPVDGDVMYAVGFSGSSQVHAYGINVKTGEIVKHDIAEFPGGFSGDVSLVSSEILVALDASRTVLVTLSLKDRRINLQEEHIRDLAPGFSGSATLLPSKLEGMFAISCDSYMLFIRVNDNGKLEVVDKIDGAVAVSDVLSYAEGQKAVGIVQYGGNKIHLTVKLGHDYSENLLKESIQMDHHRGHVQKVFINNYIRTDRSYGFRALVVMEDHSLLLLQQGEIVWSREDGLASVVDVTTSELPVEKKGVSVAKVEQGLLEWLKGHMLKLKGTLMLASPEDMVAIQALRLQSSEKSKLTRDHNGFRKLLIVLTKARKLFALHTGDGRVVWSLLLPSLQKSETCENPVALNLYQWQVPHHHALDENPSVLIVGRCGYGLEAPGVLSIVDTYTGKELNSLILTHSVLEVIPLPFSDSTEKRLHLVIDMEKNVHLYPKTPEAAGILRREFPNIYWYSVDAENSILRGHALKGNCMSEEDGEFCFTSRDLWSVILPSDSEKIISTANRKSNEVVHTQAKVMGDRDVMYKYISKNILFVATAAPKAAGEIGSATPEEAWLVVYLIDVVTGRILHRVTHHGAQGPVRAVLSENWVVYHYFNLRAHRYEMTVIEIYDQSRADNKDVWKLILGKHNLTSPVSSYSRPEIMTKSQSYFFTHSVKNIEVTLTAKGITSKQLLIGTIGDQVLALDKRFLDPRRSVNPTPAEREEGIIPLTDSLPIIPQSYVTHALKVEGLRGVVSAPAKLESTTLVFAYGVDLFFTRLAPSRTYDSLTEDFSYALLLLTIVALVAAIFVTWILSERKELRDKWR*

Click here to download the sequence:
Link to NCBI Protein BLAST