Transcript Information: R_Transcript_54066.p1


Annotated TAIR IDAT4G23740.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:12367063-12369159 | Forward length=638
E-Value3E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.011071154116
Replicate 211.806226432168
Replicate 314.673485265267
Condition 2: 8 Hour
Replicate 113.807524483031
Replicate 218.574534436768
Replicate 321.28319839515
Condition 3: 24 Hour
Replicate 120.757378419937
Replicate 215.960115459156
Replicate 318.985660774737


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54066.p1 GENE.R_Transcript_54066~~R_Transcript_54066.p1 ORF type:complete len:626 (+),score=120.84,Pkinase|PF00069.21|3.6e-34,Pkinase_Tyr|PF07714.13|1.4e-33,LRR_8|PF13855.2|3.3e-06,LRR_8|PF13855.2|3.3e-05,LRR_8|PF13855.2|0.1,LRR_4|PF12799.3|4.9,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|4.9e-05,LRRNT_2|PF08263.8|2e-08,LRR_1|PF00560.29|3.8,LRR_1|PF00560.29|41,LRR_1|PF00560.29|11,LRR_1|PF00560.29|1.7,LRR_1|PF00560.29|0.5 R_Transcript_54066:395-2272(+)
ATGGGAAAGTATTTGGGGTTGATTTTGCTGTTGTTTGGATTGATGAGTTTAGGCCATGTTTGGGCTGAACCATATGAGGATAAACAAGCATTGCTTGATTTCCTACAAAACATGCCACACTCAAGGTTTGTGAACTGGGATCCAAACAGTCCTGCTTGTACTACTTGGACTGGTGTTACCTGCAATGATGATCAAACCAGAATTACAGAACTCAGATTGCCTGGAATCGGTTTCCAGGGTTTGATTCCTCCAAACACCATTAGTCGTCTTGTTGCTCTTCAAACACTTAGCCTTAGACACAATGGGATTTCAGGTCCCTTTCCTTCTGACTTTTCAAATCTTGGAAACTTAAGTTCTTTGTATTTGCAGTCCAACAGGTTTTCAGGGCCCTTGCCTTTGAATTTCTCTGATTGGCCTAACCTTTTGGTTCTCAATTTGTCCCATAATAACTTCAATGGGAGTATTCCTTTGTCAATTTCTAATTTGACCCACCTTAATACTCTTGATCTTTCGAATAACTCGCTTTCGGGTGGAATACCTGACTTTGATCTCCCAAGTTTGAGGTTCTTGAACTTGTCCAACAACCAGTTGAATGGCACTGTGCCACGGTCTCTTTTGAGGTTCCCAAGCTCTGCTTTTGCTGGTAATAATGTTACCAATTCCGAGGTTTCGATTCCTCCGATACCATCATCATTTCCGCCTGATGCTGAGAGCCGACCTCATAGGAAAATCAGAGAGAGTGCACTCTTGGGGATCATACTTGGTGGTTTAGCACTCGTGTTTGTGGTGTCCGCAGTTTTGATGCTCGTGTTCTGCTCCAAGAAAAGGCGGGATCAAAGCAATGGCGGGATTAAGCAGGAGAAAACCTGGAAGAAGAAAAGGGTGCCGGGAGAGAGCCAAGAAGAGAAGGATAGAAGAATCACATTCTTCGAAGGCTCTAATTTGGCATTTGACCTTGAAGATCTGTTGAGAGCATCAGCTGAGGTGCTCGGTAAGGGCACGTTTGGGACAACATACAAGGCTAACATAGAGGATTCTACCATTTTGGTGGTCAAGAGGCTCAAGGAAGTGAATGTCGGAAAGAGAGAGTTTGAACACCAAATGGAGGTTGTTGGTAGTATTAAGCATGAGAATGTGGCTGCATTAAGGGCATATTATTACTCCAAAGATGAGAAGCTTATGGTCTATGATTATTTCAATCAAGGCAGCTTATTAACATTGTTACATGGGAAAAGAGGAGAAAACAAAACTCCATTGGATTGGGAAACAAGAGTAAGAATTGTGATGGGTGTAGCAAGAGGCATTGCTCACATCCATACACAAAATAGTGGGAAATTAGTTCATGGGAACATAAAGTCTTCAAACATATTCCTAAATTCAGAGAGTTATGGTTGTGTATCGGATCTTGGTCTAGCAACCATAGTGACACCATTGGCTCCTCCAATCCAAAGGATGATAGGGTACAAGGCCCCTGAAGTGACTGATCCTCGAAAAGCATCACAAGCATCCGATGTCTATAGCTTCGGAGTTCTACTACTTGAACTCTTGACAGGAAAAACTCCCCTAGGGGAAGGTATGCACCTAGTGAAATGGGTGAATTCTGTGGTTAGAGAAGAATGGACAGCTGAAGTTTTTGATGTAGAGCTCTTAAGGTATCCTAACATAGAGGAAGAAATGGTGACAATGCTACAACTGGGATTGACTTGTGTTGAAAGAGTCCCTGAAAGAAGGCCAAAGATGTGGGAAGTTGTCAGAATGGTGGAGGATATCCGGCGAGGAAACACCGGTACCCGCCCCTCATCAGAAGCTTCTACTCCAACACCACCATCCCTTTCACATGTGGTTGAAATTGGATCTACTTCCACTACCCCACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54066.p1 GENE.R_Transcript_54066~~R_Transcript_54066.p1 ORF type:complete len:626 (+),score=120.84,Pkinase|PF00069.21|3.6e-34,Pkinase_Tyr|PF07714.13|1.4e-33,LRR_8|PF13855.2|3.3e-06,LRR_8|PF13855.2|3.3e-05,LRR_8|PF13855.2|0.1,LRR_4|PF12799.3|4.9,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|4.9e-05,LRRNT_2|PF08263.8|2e-08,LRR_1|PF00560.29|3.8,LRR_1|PF00560.29|41,LRR_1|PF00560.29|11,LRR_1|PF00560.29|1.7,LRR_1|PF00560.29|0.5 R_Transcript_54066:395-2272(+)
MGKYLGLILLLFGLMSLGHVWAEPYEDKQALLDFLQNMPHSRFVNWDPNSPACTTWTGVTCNDDQTRITELRLPGIGFQGLIPPNTISRLVALQTLSLRHNGISGPFPSDFSNLGNLSSLYLQSNRFSGPLPLNFSDWPNLLVLNLSHNNFNGSIPLSISNLTHLNTLDLSNNSLSGGIPDFDLPSLRFLNLSNNQLNGTVPRSLLRFPSSAFAGNNVTNSEVSIPPIPSSFPPDAESRPHRKIRESALLGIILGGLALVFVVSAVLMLVFCSKKRRDQSNGGIKQEKTWKKKRVPGESQEEKDRRITFFEGSNLAFDLEDLLRASAEVLGKGTFGTTYKANIEDSTILVVKRLKEVNVGKREFEHQMEVVGSIKHENVAALRAYYYSKDEKLMVYDYFNQGSLLTLLHGKRGENKTPLDWETRVRIVMGVARGIAHIHTQNSGKLVHGNIKSSNIFLNSESYGCVSDLGLATIVTPLAPPIQRMIGYKAPEVTDPRKASQASDVYSFGVLLLELLTGKTPLGEGMHLVKWVNSVVREEWTAEVFDVELLRYPNIEEEMVTMLQLGLTCVERVPERRPKMWEVVRMVEDIRRGNTGTRPSSEASTPTPPSLSHVVEIGSTSTTPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST