Transcript Information: R_Transcript_54073.p1


Annotated TAIR IDAT1G54540.1
Annotated Gene NameLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20367702-20368421 | Reverse length=239
E-Value3.8E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.771297268757
Replicate 28.9984144641277
Replicate 38.2277261569854
Condition 2: 8 Hour
Replicate 116.390538168768
Replicate 220.809310448124
Replicate 319.18884551298
Condition 3: 24 Hour
Replicate 112.931336316013
Replicate 211.882833361454
Replicate 310.005807856867


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54073.p1 GENE.R_Transcript_54073~~R_Transcript_54073.p1 ORF type:complete len:245 (+),score=20.30,LEA_2|PF03168.9|3.6e-10,LEA_2|PF03168.9|7.2e+03 R_Transcript_54073:142-876(+)
ATGCCAGAAACTCAGAGAATATATCCAGCTCCAGTAATGCAGCAACCCACGACACCTTTAGTCCCTCGAAGCATTGCAGTTCCATTGGAGAAAGGATTCCCAATGCAAAGCAATCAACGACCTATTCACTCCCTCGCTAGACCGCCAAAGAGTAGAGGCTGTTTCTGCAGGGTGTTATGCTGCATTTTTTCTCTCCTGTTGACCCTTGTGATCATCCTTGCCATCCTAGGTGCTGTTTTTTACTTTGTTTATCACCCTCAGGCCCCGAACTTCAACATTGACCGGCTAAGAATAACTGATTTCCGGCTCAACATGGACCTCAGCCTGTATGCAAAGTTCAACGTTAGAATAACAGCACATAACCCGAATACGAAGATAGGAATTTACTACAAGAAAGGAGGGAAGACGAGTGTTTGGTATACAAAAACGGAGCTTTGTCGAGGATCCTTACCAGCTTTTTATCAGGCACCTCTGAACACGACTGTGTTGGATGTTTCCCTGGAGGGGCAGAATCAGTTCGGGAATAGTCTGACGTCGGCTTTGCAGCAACAGCAGCAGACAGGGAACATCCCATTAGATTTGAAGGTGGATCAGCCGGTGTCAATTAAGGTGGGAGGTTTGAAGCTCGGAAAAGTAAGGGTTCTGGTTAACTGCAAGCTTACAGTGGATAGCTTGAACACCAACAGTATCATTAGTATTCAAGCTAATAGTTGCAAGATCAGGGTGAGACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54073.p1 GENE.R_Transcript_54073~~R_Transcript_54073.p1 ORF type:complete len:245 (+),score=20.30,LEA_2|PF03168.9|3.6e-10,LEA_2|PF03168.9|7.2e+03 R_Transcript_54073:142-876(+)
MPETQRIYPAPVMQQPTTPLVPRSIAVPLEKGFPMQSNQRPIHSLARPPKSRGCFCRVLCCIFSLLLTLVIILAILGAVFYFVYHPQAPNFNIDRLRITDFRLNMDLSLYAKFNVRITAHNPNTKIGIYYKKGGKTSVWYTKTELCRGSLPAFYQAPLNTTVLDVSLEGQNQFGNSLTSALQQQQQTGNIPLDLKVDQPVSIKVGGLKLGKVRVLVNCKLTVDSLNTNSIISIQANSCKIRVRL*

Click here to download the sequence:
Link to NCBI Protein BLAST