Transcript Information: R_Transcript_5408.p1


Annotated TAIR IDAT2G17265.1
Annotated Gene Namehomoserine kinase
Annotated Gene Symbol(s)HSK, DMR1
Annotation TypeOrtholog
Chromosome Positionchr2:7508606-7509718 | Forward length=370
E-Value1.9E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.593515531123
Replicate 229.084585009384
Replicate 331.005689675003
Condition 2: 8 Hour
Replicate 129.977417771825
Replicate 226.84485814707
Replicate 329.981288254254
Condition 3: 24 Hour
Replicate 147.005958862001
Replicate 241.142659724639
Replicate 343.775409373795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5408.p1 GENE.R_Transcript_5408~~R_Transcript_5408.p1 ORF type:complete len:379 (+),score=29.28,GHMP_kinases_C|PF08544.9|8.6e-12,GHMP_kinases_N|PF00288.22|4.4e+02,GHMP_kinases_N|PF00288.22|6.9e-11 R_Transcript_5408:119-1255(+)
ATGGCAATCTCTTTCCAATCCCCTTTCAAACCCACTCTCCATCTCCCCAATCCTAACCGTAACCCTACCCTAATCCAAACCCGCATCACCACCAAACCCCCATTCATCTGCATCCTCTCTCTCTCCTCTAATACCCAACCCTTATCCCCATTCCTCACAGCCGAACCCGAACCCGTTCTCACCTCCGTCAAGACCTTCGCCCCCGCCACAGTCGCCAACCTCGGCCCCGGATTCGACTTCCTAGGATGCGCCGTCGACGGCCTCGGCGACTTCGTTTCTCTCTCCGTTGACCCGACAGTCCACCCGGGTCAACTCTCTATCACCTCCATCACCGGCCCTAAGAAGCTCTCCAAGGACCCTTTATTAAACTGTGCTGGCATCGCCGCTCTCGCCGCCATGAAGCAGCTTAACATCCGGTCAGTAGGGCTTTCCCTATCCCTCGAGAAGGGCCTCCCTTTGGGCTCCGGCCTGGGATCATCCGCCGCTAGCGCCGCCGCTGCCGCTGTCGCTGTTAACTCCATTTTCGGTGGCCCGCTTTCGATGCAGGAGCTCGTTAATGCCGGGCTCGAGTCGGAGTCCAAAGTGTCTGGTTACCACGCTGATAATATCGCGCCGGCGATCATGGGTGGGTTCGTGCTGGTTAGGAACTACGAGCCATTGGAGCTGATCAAGCTGGAGTACCCTGAAAACAAGGAGCTGCTGTTCGTGCTGGTGACCCCCGAGTTCGAGGCCCCCACCAAGAAGATGAGGGGCGCCTTGCCAGCCGAGATCGGGATGCCGCATTTCGTGTGGAATTGTAGCCAGGCTGGAGCTTTGGTTGCGGCGGTGTTGAGAGGTGACTTGGAGGGGCTCGGGAAGGCCATGTCGTCGGATAAAGTGGTGGAGCCAAGACGGGCGCCTTTGATTCCCGGGATGGAGGCAGTCCAGAGGGCCGCCGTGGAGGCTGGGGCATTTGGGTGTACGATAAGTGGGGCAGGGCCGACTGCGGTGGCGGTGACGGATAGGGAGGAGAAGGGGAGAGAGATTGGAGAGAGGATGGTGGAGGCGTTTGAGAAGGAAGGTGGATTGAAGGCTGTGGCTGTTGTTAAGAGGCTTGATAGGCTGGGTGCTAGAGTTGTTAGTAGTACACCTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5408.p1 GENE.R_Transcript_5408~~R_Transcript_5408.p1 ORF type:complete len:379 (+),score=29.28,GHMP_kinases_C|PF08544.9|8.6e-12,GHMP_kinases_N|PF00288.22|4.4e+02,GHMP_kinases_N|PF00288.22|6.9e-11 R_Transcript_5408:119-1255(+)
MAISFQSPFKPTLHLPNPNRNPTLIQTRITTKPPFICILSLSSNTQPLSPFLTAEPEPVLTSVKTFAPATVANLGPGFDFLGCAVDGLGDFVSLSVDPTVHPGQLSITSITGPKKLSKDPLLNCAGIAALAAMKQLNIRSVGLSLSLEKGLPLGSGLGSSAASAAAAAVAVNSIFGGPLSMQELVNAGLESESKVSGYHADNIAPAIMGGFVLVRNYEPLELIKLEYPENKELLFVLVTPEFEAPTKKMRGALPAEIGMPHFVWNCSQAGALVAAVLRGDLEGLGKAMSSDKVVEPRRAPLIPGMEAVQRAAVEAGAFGCTISGAGPTAVAVTDREEKGREIGERMVEAFEKEGGLKAVAVVKRLDRLGARVVSSTPR*

Click here to download the sequence:
Link to NCBI Protein BLAST