Transcript Information: R_Transcript_54082.p1


Annotated TAIR IDAT3G12280.1
Annotated Gene Nameretinoblastoma-related 1
Annotated Gene Symbol(s)RBR1, RBR, RB, ATRBR1, RB1
Annotation TypeOrtholog
Chromosome Positionchr3:3913671-3918433 | Reverse length=1013
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6358055096465
Replicate 23.8269118985371
Replicate 33.7914600159149
Condition 2: 8 Hour
Replicate 13.4014846872528
Replicate 22.9300465860864
Replicate 36.4022429577326
Condition 3: 24 Hour
Replicate 15.9712917321319
Replicate 25.3888711377962
Replicate 36.5339650444629


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54082.p1 GENE.R_Transcript_54082~~R_Transcript_54082.p1 ORF type:complete len:1015 (+),score=204.90,RB_A|PF01858.13|5.7e-59,RB_B|PF01857.16|1.9e-40,DUF3452|PF11934.4|1.5e-35,DUF3452|PF11934.4|2.6e+03,DUF3452|PF11934.4|2.1e+03 R_Transcript_54082:165-3209(+)
ATGGAAGACTTGAAGCCTGCAAATTCGATCAAGGAGAATGACAGCGAAATTGAAGCTCGTTTCAATGATCTCTGCAAGAACCAATTTTGTTTGGATGAAAGGATACTATCAGACGCCATAAAACTCTTTATGGAGAGAAGAAGTATCTTGTCAACGAATATTTTAGCTATAGGGAGCATGAAGCTTGAAGAATTGGAAAGATATTTGTTTGCATTTGTTCTCTACTCTGTTAAGAGACTGGGTGAGAGGAATAAAGGTGATGCGAGTGAAGGGGCGAAAGAAAATGGAGTTACTTTGTGTCAGATTTTGAGAGCTTTGAAGTTGAACCTTGTGGACTTCTTCAAAGAGCTTCCTCAGTTTGTTGTCAAGATTGGCCCAACTTTAAGTAACATGTATGGTATTGATTGGGAGAAGAGGCTGGAGGTGAAGGAGTTGGAGGCTGATTTCGTTCACTTGAATCTTCTAAGCAAGTACTACAAGCGGGCATTCCAAGAATTTTTCAAGACAAATGAAGCTGATATGCAACCATCTGATGCAAAGACTTCCCGTTTTGGTTACATTTCAGATTACCACAAATTTGGCTGGTTGCTATTTTTGGCACTTCGTGTTCATGCATTCGGCAGGTTTAGGGACCTAGTCACCTGCACTAATGGCTTAGTCTCTGTGTTGGCTATCTTGATCATCCACATTCCAGTTCAGTTAAGGAAATTCACTTTTCTTGACTCATCTCTCTTCGAGAAGAAAACCAACAGAGGTATCAACTTGGTAGCGTCACTTTGCAACAAATATGAGTCATCTGAAGATGATGTGAAGAAAATGATGGAAGATGCTAATAGTTTGATTATATATATTTTGGAGAAAAATCCTATTGCTGCTTCAGAATGCAAAACGGAAAATTTTGACTACATTGATCCAGATGATTTGCTATATTTTGAAGATCTGCTGGAAGACATGTCACTTGCATCTAATATATCCATGCTAGAGAAGGATTATGATGCTGCAATTTGGAATAAAGGTGATATTGATGAAAGAGTTTTTATCAATGAGGATGATAGCTTACTAGGTTCAGTGAGTCTCTCTGGAGTTGCTGTGAATCTAAGTGGCACTAAGAGAAAGCTTGATGTCATGTCCTCGCCAACAAGAACAATTACTAGTGTCTTGTCCCCTTCCATATCACCTGCAACACACACAAATATGGGTCATGGACTTGTCAATGGGAAAATGGCAGCCACACCTGTAAGTACTACAATGACAACTGCTAAGTGGCTGCGCACTGTAGTTTCCCCTCTTCCATCCAAACCATCACCAAAGCTGGAGAAATACTTCACAGCATGTGATAGGGATGTAAGTAATGAGATTGTGCGCAGGGCTCATATAGTTTTGGAGGCCATTTTCCCTAATAGTGCTCTTGGAGAGCGATGTACTGCTGGGAACCTGCCAAATGCTAACCTGATGGACAACATATGGGCGCAACAAAGAAGGCTGGAAGCTCTAAAGCTATATTACAGGGTCCTGGAGGCAATGTGCATTGCAGAGGCTCAGTTGTTGTGTGCAAATAATCTGACATCTTTGCTAACCAATGAAAGATTCCACAGGTGTATGCTTGCTTGCTCTGCAGAACTAGTTTTGGCCACTCATAAGACAGTGACAATGTTGTTCCCAGCTGTCTTAGAGAAAACAGGAATTACAGCATTTGATCTTAGTAAGGTAATAGAAAGTTTCATACGACATGAAGATTCTCTACCAAGAGAGTTGAGAAGGCATTTAAATTCCTTGGAAGAGAGACTCTTGGAGAGCATGGTTTGGGAAAAGGGCTCATCTATGTATAACTCTTTGATAATTGCAAGACCAGCCCTGTCTGCAGAGATAAACCGCCATGGATTACTGGCAGAGCCTATGCCATCTTTAGATTCAATTGCTGTGCACAGTAATGTTCCCTCTGGAGGGTTACCACCATTGCCATGTTCACAGAAGCATGATATTGTAACAGGGCAAAATGGCGATATCAGGTCCCCAAAGAGAATTTCCACAGAGAATCGAAGCGCACTCGTAGAGCGCAACTCTTTCACATCACCAGTGAAGGATCGCTTGATAAATAATCTGAAGCAAAAGCTAACCCCTCCAGCATTGCAGTCTGCATTTGCAAGTCCAACAAGACTGAGCCCAGGGGGTGGAGGTGAAACATGTGCAGAAACAGGCATCAATATATTCTTCAGCAAGATTGTGAAGTTAGCAGCTGTCAGAATTAATGGCATGGTTGAAAGGCTTCAACTACATCAACATTCGAGGGAGAGTGTGTATTGTCTTTTCCACAAAATTCTGAATCAACAGACACAACTTTTCTTCAATCGGCACATTGACCAAATAATTCTCTGTTGTTTCTATGGAGTTGCGAAGGTTTCTCAACTAAACCTCACATTCAAGGAGATTATTTTGAACTATCGTAAGCAACCTTACTGTAAACCACACATTTTTCGCAGTGTGTTTGTTGACTGGTCCTCAGCATGCTGGAATGGAAGACAGGGGCAGGATCATGTTGACATTATTACATTTTACAATGAGATATTTATTCCTTCTGTAAAGCCTCTTCTGGTGGAGCTTGTTGCTGGAGGAACAAGTGTGAGAACCAGCCCAGCTCGTGAAACTAACAATGACAAAGATACTCCATGCCTAAGATCTCCAAAGATATCTACTTTCCCAAGCCTTCCTGACATGTCCCCAAGGAAAGTTTCTTCAGTACACCATGTTTACGTCTCTCCATTACGATCATCCAAGATGGATGCCCTTATCTCACATAGCTCCAAGAGTTACTATGCTTGTGTGGGTGAAAGCTCTCATGCTTATCGAAGCCCTTCAAAGGATCTGTCAGCCATTAACAACTGCTTGAATAGTGGTAACAACCATAGGCTCAAGGCAGTGCTGAATTCTGATGCTAATGCCAGGTTTGTAAGTGATTCTCTTGTGGCCACCAGTCTCTACCTTCAGAATGGCAGTTGTACCAGTCCATTGGTCTCACCCCTGAAAACAGAACAGCTGGATTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54082.p1 GENE.R_Transcript_54082~~R_Transcript_54082.p1 ORF type:complete len:1015 (+),score=204.90,RB_A|PF01858.13|5.7e-59,RB_B|PF01857.16|1.9e-40,DUF3452|PF11934.4|1.5e-35,DUF3452|PF11934.4|2.6e+03,DUF3452|PF11934.4|2.1e+03 R_Transcript_54082:165-3209(+)
MEDLKPANSIKENDSEIEARFNDLCKNQFCLDERILSDAIKLFMERRSILSTNILAIGSMKLEELERYLFAFVLYSVKRLGERNKGDASEGAKENGVTLCQILRALKLNLVDFFKELPQFVVKIGPTLSNMYGIDWEKRLEVKELEADFVHLNLLSKYYKRAFQEFFKTNEADMQPSDAKTSRFGYISDYHKFGWLLFLALRVHAFGRFRDLVTCTNGLVSVLAILIIHIPVQLRKFTFLDSSLFEKKTNRGINLVASLCNKYESSEDDVKKMMEDANSLIIYILEKNPIAASECKTENFDYIDPDDLLYFEDLLEDMSLASNISMLEKDYDAAIWNKGDIDERVFINEDDSLLGSVSLSGVAVNLSGTKRKLDVMSSPTRTITSVLSPSISPATHTNMGHGLVNGKMAATPVSTTMTTAKWLRTVVSPLPSKPSPKLEKYFTACDRDVSNEIVRRAHIVLEAIFPNSALGERCTAGNLPNANLMDNIWAQQRRLEALKLYYRVLEAMCIAEAQLLCANNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLEKTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIIARPALSAEINRHGLLAEPMPSLDSIAVHSNVPSGGLPPLPCSQKHDIVTGQNGDIRSPKRISTENRSALVERNSFTSPVKDRLINNLKQKLTPPALQSAFASPTRLSPGGGGETCAETGINIFFSKIVKLAAVRINGMVERLQLHQHSRESVYCLFHKILNQQTQLFFNRHIDQIILCCFYGVAKVSQLNLTFKEIILNYRKQPYCKPHIFRSVFVDWSSACWNGRQGQDHVDIITFYNEIFIPSVKPLLVELVAGGTSVRTSPARETNNDKDTPCLRSPKISTFPSLPDMSPRKVSSVHHVYVSPLRSSKMDALISHSSKSYYACVGESSHAYRSPSKDLSAINNCLNSGNNHRLKAVLNSDANARFVSDSLVATSLYLQNGSCTSPLVSPLKTEQLDS*

Click here to download the sequence:
Link to NCBI Protein BLAST