Transcript Information: R_Transcript_54090.p1


Annotated TAIR IDAT4G12980.1
Annotated Gene NameAuxin-responsive family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7589670-7591074 | Reverse length=394
E-Value6E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.058238643897
Replicate 225.010299025296
Replicate 322.401441913884
Condition 2: 8 Hour
Replicate 14.5010781153024
Replicate 23.9460379719739
Replicate 35.2052412808463
Condition 3: 24 Hour
Replicate 19.9596369590775
Replicate 211.189800466543
Replicate 38.8516452777894


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54090.p1 GENE.R_Transcript_54090~~R_Transcript_54090.p1 ORF type:3prime_partial len:136 (+),score=3.25,DUF568|PF04526.9|1.1e-06 R_Transcript_54090:95-499(+)
ATGGCTTCTTCTTCTCTAATTCAAATCGTAGCGCCTCTTTCTCTCCTTTCCCTCCTAATAGCCTTACAACCAACACTCATCTCTTCACAAACCATCACTTGCAAAACAAAACCCTTCTTCAATGTTACTTATGACAATTGCAATGATCTCCCAACCCTAAATGCCGTCCTCCATTGGACCTTTGACACCTCCACATCCTCCCTCTCGGTCGCCTTCACCGCCCCGCCCCCCACCTCCAACGGCTGGGTTGCCTTCGCCTTGAACCCAACGGGCTCCGGCATGGTGGGGGCCCAAGCTCTCATTGCCTTCAAGCCCACTCCTTCCGGCCCAGTCTCGGTTTCCACCTATAACATCCAGTCCTACAGTACCATCATCAAGGGCCCAATCTCCTACGACGTCACCCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54090.p1 GENE.R_Transcript_54090~~R_Transcript_54090.p1 ORF type:3prime_partial len:136 (+),score=3.25,DUF568|PF04526.9|1.1e-06 R_Transcript_54090:95-499(+)
MASSSLIQIVAPLSLLSLLIALQPTLISSQTITCKTKPFFNVTYDNCNDLPTLNAVLHWTFDTSTSSLSVAFTAPPPTSNGWVAFALNPTGSGMVGAQALIAFKPTPSGPVSVSTYNIQSYSTIIKGPISYDVTH

Click here to download the sequence:
Link to NCBI Protein BLAST