Transcript Information: R_Transcript_54145.p1


Annotated TAIR IDAT3G55070.1
Annotated Gene NameLisH/CRA/RING-U-box domains-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20408377-20410887 | Forward length=418
E-Value5.1E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87514196358241
Replicate 20.09587351788264
Replicate 30.52298487662449
Condition 2: 8 Hour
Replicate 10.27951900624709
Replicate 20.45947017481888
Replicate 30.45586236717867
Condition 3: 24 Hour
Replicate 10.47173576495282
Replicate 20.40283577882333
Replicate 30.79955085614237


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_54145.p1 GENE.R_Transcript_54145~~R_Transcript_54145.p1 ORF type:5prime_partial len:438 (+),score=75.08,CLTH|PF10607.5|4.3e-38 R_Transcript_54145:3-1316(+)
GACAATCACACCACAAGACACACCACCTCAACAAGAAGCAAGAGAAAAATAGAATCTCCCCTTGGACAAACCAAATACAACACCAAACCACAAACGACACCGTTTCCTTCCCCAAAACCACACTCATCCATTTCTTCTTCCTCAATCATCAATTCATCATCATCATCATCATCATCACCAACACCACCTTCTCCCCCAATTCTCCCCATCCAAACCATCCGATCTCAAACTCCTCCAATGGAAGTCGACCCTCTTCCAAATGGCAACTCCACCACAAACACCACCAACAACCCTTCATCCACTCAAACCCCACCATCAAAACTAACTCCAACTCCAACAACAAACCCCACAACACCCCACTTATCAGAATCACTCAAACTAGAACACCAGTTCTTGAGAGTCCCCTTTGAGCACTATAAGAAAACCATTCGTACCAACCACCGTGCCGTCGAAAAGGAGGTTTCTTCTGTCATTTCTGCTGTTGATTCAACTTCTCCTGACTTGTCCCCTGATGATGCTGTTACCCATCTCTCTTCTCTTGTTTCTAGGCTTCAAGGCCTCAAGAGAAAGTTGGAAGAGGGAAGCCGAACCGAGAACTTGCAAGCACAACGCTGTCGAGCTCGGTTAGATCATTTGGAATCTGCAGATGCGGACTTATCAGAATGGAGTAACACACGCTTGAAGCGGATTCTTGTGGACTATATGCTTCGTATGTCATATTATGAGAGTGCAGTAAAGTTGGCTGAAACCAGCAATATACAGGATCTTGTTGATATTGATGTGTTTCATGAAGCTAGAAGAGTAATTGAAGCTCTTCAAAATAAGGAGGTAGCTCCTGCATTAGCATGGTGTGCTGACAACAAGTCCAGGCTGAAGAAGTCAAAGAGTAAATTTGAATTTCAGCTAAGACTCCAAGAGTTCATAGAATTGGTAAGAGCTGATAATAACCTGCGTGCAATTCATTATGCTCGAAAGTACCTAGCACCTTGGGGAGCCACTCATATGAAAGAGTTGCAGAGAGTTATTGCGACACTTGCTTTTAAAAGCAGTACTGAATGTGCTACCTACAAGGTTCTTTTTGAACCCAAACAATGGGATTTCCTGGTGGACCAATTCAAGCAGGAATTCTGTAGGCTGTACGGCATGACCCTTGAACCTTTGCTAAATATCTATCTTCAGGCTGGGTTGTCTGCTTTAAAAACTCCGTATCCTTCTTTGTTTGTTAATATGTTCGTTATTTTGTTTACCTGTATACATCCTTCATTTAAAGCATTTACAGTACTGCTCATGGACGTGACTTATGCTGAAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_54145.p1 GENE.R_Transcript_54145~~R_Transcript_54145.p1 ORF type:5prime_partial len:438 (+),score=75.08,CLTH|PF10607.5|4.3e-38 R_Transcript_54145:3-1316(+)
DNHTTRHTTSTRSKRKIESPLGQTKYNTKPQTTPFPSPKPHSSISSSSIINSSSSSSSSPTPPSPPILPIQTIRSQTPPMEVDPLPNGNSTTNTTNNPSSTQTPPSKLTPTPTTNPTTPHLSESLKLEHQFLRVPFEHYKKTIRTNHRAVEKEVSSVISAVDSTSPDLSPDDAVTHLSSLVSRLQGLKRKLEEGSRTENLQAQRCRARLDHLESADADLSEWSNTRLKRILVDYMLRMSYYESAVKLAETSNIQDLVDIDVFHEARRVIEALQNKEVAPALAWCADNKSRLKKSKSKFEFQLRLQEFIELVRADNNLRAIHYARKYLAPWGATHMKELQRVIATLAFKSSTECATYKVLFEPKQWDFLVDQFKQEFCRLYGMTLEPLLNIYLQAGLSALKTPYPSLFVNMFVILFTCIHPSFKAFTVLLMDVTYAEI*

Click here to download the sequence:
Link to NCBI Protein BLAST